| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2592 |
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| Symbol | htrB |
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| ID | 5135538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2746788 |
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| End bp | 2747744 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640534041 |
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| Product | lipid A biosynthesis lauroyl acyltransferase |
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| Protein accession | YP_001218471 |
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| Protein GI | 147673430 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
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| TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00440873 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTACAA TGAGTCAAGA TAAATACAGC AAACCTGAAT TCTCCTTCTC TTTATTGCAC
CCAAAATACT GGGGAGTCTG GCTTGGTTTT GGCCTACTCG CCCTACTGGT TAACCTGCTG
CCTTATCCTG TGCTGCTAAA AATCGGCCGC AGTTTAGGCC AATTTTCGAT GCGCTTTGGT
AAAAAGCGTG TCCACATCGC CAGACGTAAT CTGGAACTCG CCTTCCCAAC CATGAGCCAA
AGCGAGATCG ATGCGTTTGT CTTGGAAAAC TTCAAAAACA CCGGTGCGGC TCTCATTGAA
ACTGGGATCA CTTGGTTCTG GCCAACCTGG CGCTTTAAGC GCATTTTGAT TGATAAAGAT
ACCCAAGCCA TTCGCCAACA TGCACAAACA GGCAAAGGCG TTTTGCTGTG TTGCGTACAT
GCACTCAATC TGGAAATCAC CGCGCGCGCG TTTGCTGTGC TAGGCATCGG TGGCTATGGC
GTGTATCGTC CGCACAGTAA TCCTGCCTAT GAGTTCATTC AGTACCGTGG TCGAACACGC
AATGGCAATC AGCTTATCAA CCGAACCGAT ATTAAGCAGA TGATCCGCGT GTTACGCCAA
GGCGAGCGTC TGTTCTACCT GCCAGACCAA GACTATGGCC ACAATAAGTC GGTGTTTGTG
CCTTTCTTTG CGGTAGAAGA AGCTTGTACC ACCACCGGCA CCAGTATTTT GGCTTACACC
AGCCACTGCG CGATTGTCAT CGGCTCCGGT TTCCGTAACG CGCAAGGGCG TTATGAGATC
ATGGCTGATA AATCAATTGA AGCGGACTAC CCACAAAAAG ATGAAACCGC TGCCGCGGCT
TACATGAATA AATTTGTCGA AGAGATTATA CTGCGCGCCC CCGAGCAATG GATGTGGCTG
CACAAACGCT TCAAATCCTT GCCGGACTAC GAACTGACCA ACTCGCGCTA TCAGTAA
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| Protein sequence | MSTMSQDKYS KPEFSFSLLH PKYWGVWLGF GLLALLVNLL PYPVLLKIGR SLGQFSMRFG
KKRVHIARRN LELAFPTMSQ SEIDAFVLEN FKNTGAALIE TGITWFWPTW RFKRILIDKD
TQAIRQHAQT GKGVLLCCVH ALNLEITARA FAVLGIGGYG VYRPHSNPAY EFIQYRGRTR
NGNQLINRTD IKQMIRVLRQ GERLFYLPDQ DYGHNKSVFV PFFAVEEACT TTGTSILAYT
SHCAIVIGSG FRNAQGRYEI MADKSIEADY PQKDETAAAA YMNKFVEEII LRAPEQWMWL
HKRFKSLPDY ELTNSRYQ
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