Gene VC0395_A2590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2590 
SymbolpyrE 
ID5135451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2745070 
End bp2745714 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content49% 
IMG OID640534039 
Productorotate phosphoribosyltransferase 
Protein accessionYP_001218469 
Protein GI147675512 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.431923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAG CTTACCAGCG TGAATTTATT GAGTTTGCCC TAGAAAAACA GGTGCTGAAG 
TTTGGCGAAT TTACTTTGAA GTCAGGCCGT AAAAGTCCTT ATTTCTTTAA CGCTGGTCTG
TTTAATGCTG GCCGTGATTT AGCGCGCTTG GGCCGTTTTT ATGCGGCAGC GCTAGTGGAT
TCAGGTATTG AATTTGATGT GCTGTTTGGC CCTGCTTACA AAGGCATTCC GATTGCTACC
ACCACAGCAG TCGCATTGGC GGATCACCAC GATGTGGATA CGCCTTACTG CTTTAACCGC
AAAGAGGCCA AAAATCACGG CGAAGGCGGT AATCTAGTGG GCAGCAAGTT AGAAGGCCGC
GTGATGTTGG TGGATGATGT GATCACCGCT GGTACGGCAA TTCGTGAATC GATGGAGCTT
ATCCAAGCCA ACAAGGCTGA TTTAGCCGGC GTGCTAGTGG CGATCGATCG CCAAGAGAAA
GGCAAGGGCG AGCTCTCAGC GATTCAAGAA GTGGAACGTG ATTTTGGTTG TGCGGTGATT
TCGATTGTGA GCCTGACCGA TCTCATCACC TATCTTGAAC AGCAAGGTAA CAACACTGAG
CATCTAGAGG CGGTGAAAGC GTATCGTGCA CAGTACGGAA TTTAA
 
Protein sequence
MMKAYQREFI EFALEKQVLK FGEFTLKSGR KSPYFFNAGL FNAGRDLARL GRFYAAALVD 
SGIEFDVLFG PAYKGIPIAT TTAVALADHH DVDTPYCFNR KEAKNHGEGG NLVGSKLEGR
VMLVDDVITA GTAIRESMEL IQANKADLAG VLVAIDRQEK GKGELSAIQE VERDFGCAVI
SIVSLTDLIT YLEQQGNNTE HLEAVKAYRA QYGI