Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2590 |
Symbol | pyrE |
ID | 5135451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2745070 |
End bp | 2745714 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640534039 |
Product | orotate phosphoribosyltransferase |
Protein accession | YP_001218469 |
Protein GI | 147675512 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0461] Orotate phosphoribosyltransferase |
TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.431923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGAAAG CTTACCAGCG TGAATTTATT GAGTTTGCCC TAGAAAAACA GGTGCTGAAG TTTGGCGAAT TTACTTTGAA GTCAGGCCGT AAAAGTCCTT ATTTCTTTAA CGCTGGTCTG TTTAATGCTG GCCGTGATTT AGCGCGCTTG GGCCGTTTTT ATGCGGCAGC GCTAGTGGAT TCAGGTATTG AATTTGATGT GCTGTTTGGC CCTGCTTACA AAGGCATTCC GATTGCTACC ACCACAGCAG TCGCATTGGC GGATCACCAC GATGTGGATA CGCCTTACTG CTTTAACCGC AAAGAGGCCA AAAATCACGG CGAAGGCGGT AATCTAGTGG GCAGCAAGTT AGAAGGCCGC GTGATGTTGG TGGATGATGT GATCACCGCT GGTACGGCAA TTCGTGAATC GATGGAGCTT ATCCAAGCCA ACAAGGCTGA TTTAGCCGGC GTGCTAGTGG CGATCGATCG CCAAGAGAAA GGCAAGGGCG AGCTCTCAGC GATTCAAGAA GTGGAACGTG ATTTTGGTTG TGCGGTGATT TCGATTGTGA GCCTGACCGA TCTCATCACC TATCTTGAAC AGCAAGGTAA CAACACTGAG CATCTAGAGG CGGTGAAAGC GTATCGTGCA CAGTACGGAA TTTAA
|
Protein sequence | MMKAYQREFI EFALEKQVLK FGEFTLKSGR KSPYFFNAGL FNAGRDLARL GRFYAAALVD SGIEFDVLFG PAYKGIPIAT TTAVALADHH DVDTPYCFNR KEAKNHGEGG NLVGSKLEGR VMLVDDVITA GTAIRESMEL IQANKADLAG VLVAIDRQEK GKGELSAIQE VERDFGCAVI SIVSLTDLIT YLEQQGNNTE HLEAVKAYRA QYGI
|
| |