| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2589 |
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| Symbol | rph |
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| ID | 5137457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2743989 |
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| End bp | 2744705 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640534038 |
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| Product | ribonuclease PH |
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| Protein accession | YP_001218468 |
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| Protein GI | 162329623 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.704715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCCAG ATAACCGCGC TGCGGACCAA GTTCGCTCCA TCAAAATCAC CCGTCACTAC
ACTGCGTACG CAGAAGGCTC GGTGTTGGTG GAATTTGGCA ACACCAAAGT GTTGTGTAAT
GCCAGCATTG AAGAAGGTGT GCCACGTTGG TTAAAAGGCC AAGGTAAAGG CTGGGTGACA
GCGGAATACG GCATGTTGCC GCGTGCAACC CATTCACGCA CGCGCCGTGA AGCGACCAAT
GGTAAGCAAG GCGGTCGTAC CATGGAAATC CAGCGTCTGA TCGCGCGCAG CCTACGTGCT
GTGGTGGATC TGGAAGCGAT GGGCGAAATC ATGATCACCG TTGATTGTGA TGTGATTCAA
GCCGATGGTG GTACGCGTAC CGCTTCGATT ACTGGTGCAA GCGTGGCACT GGCCGATGCT
TTTGCCCATC TGATCGCCAA AGGCCAACTG AAGAAGAACC CGATGAAAGG CCATGTGGCT
GCGGTTTCGG TTGGTATCCT AGGTGAAGAT GTGCTGTGCG ATCTGGAATA TGTCGAAGAT
TCTGCCGCTG ATACGGATAT GAACGTGGTC ATGACCGAAG AAGGCAAAAT GATTGAAATT
CAAGGCACTG CTGAAGGTGA GCCGTTCAGT CATGAGCAGT TGCTGGAATT GCTGGCTGTC
GCGAAAAAAG GCATTGCCGA TATTGTCGCA GTGCAGAAGG CATCGTTGTT AGATTGA
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| Protein sequence | MRPDNRAADQ VRSIKITRHY TAYAEGSVLV EFGNTKVLCN ASIEEGVPRW LKGQGKGWVT
AEYGMLPRAT HSRTRREATN GKQGGRTMEI QRLIARSLRA VVDLEAMGEI MITVDCDVIQ
ADGGTRTASI TGASVALADA FAHLIAKGQL KKNPMKGHVA AVSVGILGED VLCDLEYVED
SAADTDMNVV MTEEGKMIEI QGTAEGEPFS HEQLLELLAV AKKGIADIVA VQKASLLD
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