Gene VC0395_A2587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2587 
Symbol 
ID5136744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp2742398 
End bp2742886 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content42% 
IMG OID640534036 
Producthypothetical protein 
Protein accessionYP_001218466 
Protein GI147675088 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID[TIGR00645] conserved hypothetical transmembrane protein 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGTT TGATCGAAAA ACTTCTCTAT TCTTCACGTT GGATTATGGC GCCGATTTAT 
CTTGGCTTAA GCCTGCTGCT GCTCGCGCTA GGTATTAAAT TCTTCCAAGA AATTTTCCAC 
CTACTGCCAA ACATTTTTAC TATCAAAGAA GTGGACCTAA TCCTAGTCGC ACTCTCTTTG 
ATTGATGTGT CGCTGGTGGG CGGCCTTATT GTGATGGTGA TGTTTTCCGG ATATGAGAAC 
TTCGTGTCTA AACTCGATGT CGATGAGAGT GAAGATAAAC TCGGTTGGCT GGGCAAGCTT 
GATACCAGCT CGCTGAAAAA CAAAGTATCT GCTTCGATTG TGGCCATCTC ATCAATTCAT 
CTGCTCAAAG TGTTTATGAA TACCGAAAAC ATCGAAAGTG ACAAAATCAA ATGGTACTTG 
CTGCTGCACA TTACTTTTGT GGTCTCGGCT TTTGCGATGG GCTACTTGGA TAAAATAACC 
AAGAAGTAG
 
Protein sequence
MERLIEKLLY SSRWIMAPIY LGLSLLLLAL GIKFFQEIFH LLPNIFTIKE VDLILVALSL 
IDVSLVGGLI VMVMFSGYEN FVSKLDVDES EDKLGWLGKL DTSSLKNKVS ASIVAISSIH 
LLKVFMNTEN IESDKIKWYL LLHITFVVSA FAMGYLDKIT KK