| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2580 |
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| Symbol | |
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| ID | 5135125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2732835 |
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| End bp | 2734991 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640534029 |
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| Product | iron(III) compound receptor |
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| Protein accession | YP_001218459 |
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| Protein GI | 147673484 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000113666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGTAAAA TTAATACTAA TAAAAACGAT TCTCAAATCT ATAGCAGAGG TTTTATCATG
CGCAATATTC GCCCGAGTCA GCTCGGACAA TACATTCGTC GTGCGCTTCG CTTGCACTTC
ATCCCTGTTG TTTTGGTTGC CGCACCGAGT GTAATGGCCA ATACCAACCA AGAAACTGAG
CAGTTAGAAA CCTTAGTGGT GACCGCTTCA GCCTTGAAAG TGGAAACACC CGCACAAGAA
ACGCCAAAAG CGCTATCGAT TGTCACTCAA GAAGAGATTG TGGCTCGCGC GCCACAAAAA
TTGGATGAAG CGCTGCGCTA TACCTCCGGC GTCACCGCTC AACCTTATGG CGCGGACAAT
GATACTGATT GGCTCAAAGT GCGTGGTTTT GATGCCGCAA CCTACCAAGA TGGCAGCCGC
CTGTTCCGTG ATGGTTACTA CACTTGGCTT ATCGAACCTT ACGCTTTAGA GCGTATTGAA
GTGCTGAAAG GTCCCGCTTC GATTTTGTAT GGTGAGGCAC CTCTAGGTGG AGTGGTCAAT
GCGGTGCAGA AGAAACCGAC CGACATTCCA CAAGGTGAGG TTGGCCTACA AGTGGGTAAT
GATGCGCTGC GCACCTTAAC CTTAGACATT TCCGATTACG CGAATCAAGA CGGTTCCGTG
CGTTACCGTT TAGTCGCGTT GATGAAAGAG AATGATGGGC AGTTGAACGG TACGCAAACC
AGCCGTAACT ACCTTGCGCC AAGTCTCAGC ATCGATATTT CTGAGCAAAC CCGTTTAACC
CTGTTGGCGA GCTTTTTGGA AGACAGCGGT GTGCCGACTA ACCCATTTTT CCCTGCGGCG
GGCACCTTAA TCGATTCCAA CTTTGGTCAT ATCGATCCCT CTACCAACTT AGGGCAACCG
GATTACGACA AGTATGAGCG TCGTCAGGTG TCATTGGGTT ACTTGTTCGA GCATGATCTT
AATGATGTCT GGGCGCTGTC ACAGACCTTC AATTACGGCG ATAACGATCT CTATCTGCGC
AGCAGCTACG CTTTTTCGAA TGATGACCCA AGTAAAGACA CATTAACGCA AGGCATTGTG
TTCCGTGATG GTTCAACCGA AAGCTTGAGC TTAGATAACA AAGCGGTGGC GAAGTGGGAT
TCTGCCCGTG TTGAAAACAC GCTGTTGATG GGCTTAGAGC TGCAACGCCA CCAGACTCAA
GGTGTTGAGT TAGATAACTA CAGCTTCGGC ACCATCAATC CGTTCAACCC GATTTATGGC
AATTACACGC CTATCGATGA ATCTTCCGCA GCGGATCGCA CCATTACCAA AGAGCAAGCG
AGTTTGTACG CGCAGTACCA AATCAAGCTG GATCAGCAGT GGATTGGTCT GATTGGCGGC
CGTATGGATT GGGTCGATAC TGAAAACGAA AGCCAAAAAA ACGCGCAGCG TAAAAGCCGC
AGCGATGCGG AGTTTTCATT CAATGCGGGT TTGATGTATC TGGCCAGTAA TGGTGTATCG
CCTTACCTCA GCTATTCACA ATCGTTTGAT GTGCTCAGCA CTATCGATAG CGCGAAGGGT
GAGTTGTATA AGCCACTGAA AGGCGAACAA ACTGAGGTTG GCGTGAAGTA CCAGCCAGAG
TTTTATGATG GTTACATCAA TCTAGCTTGG TTTGATATCA CCCAACAAAA TGCGCTGGTG
ACCAACCCAA CGACTTTTGT GGCGACGCAA ACGGGTGAAA TGACCGCCCA AGGTATTGAA
GTCGAAAGCG TAGGTTATGT CACTGATAGC TTGAAACTGA CCGCCAGCTA CACCTTCACC
GATGCCAAAA CCGATGAAAC GGGTGGCAAG GGGACGCAAC AAGCCGGTTT GATCCCGAAA
CATCAAGCGT CAGCGTGGCT GGATTACGAT GCGGCGCAGC TTGGTCTGCA AGGTTGGACG
TTTGGCTCCG GCGTACGTTA CATCGGTGAG TCGAAAGATA ATCCGCGTTC GAGCGATCGT
ACGGTGCCGA GTGTAACCTT GGTCGATCTG ATGGCGGGCT ATGAAATCAC TGAAAACTGG
CAAGTGCAGC TCAACATCAA CAACCTGTTT GATCGCGAGT TCGTTTCTGG CTGTGATTAC
TGGTGTTACT ACGGCCAATC ACGCAGCGCG GTACTCAGTG CTAACTATCG CTGGTAA
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| Protein sequence | MRKINTNKND SQIYSRGFIM RNIRPSQLGQ YIRRALRLHF IPVVLVAAPS VMANTNQETE
QLETLVVTAS ALKVETPAQE TPKALSIVTQ EEIVARAPQK LDEALRYTSG VTAQPYGADN
DTDWLKVRGF DAATYQDGSR LFRDGYYTWL IEPYALERIE VLKGPASILY GEAPLGGVVN
AVQKKPTDIP QGEVGLQVGN DALRTLTLDI SDYANQDGSV RYRLVALMKE NDGQLNGTQT
SRNYLAPSLS IDISEQTRLT LLASFLEDSG VPTNPFFPAA GTLIDSNFGH IDPSTNLGQP
DYDKYERRQV SLGYLFEHDL NDVWALSQTF NYGDNDLYLR SSYAFSNDDP SKDTLTQGIV
FRDGSTESLS LDNKAVAKWD SARVENTLLM GLELQRHQTQ GVELDNYSFG TINPFNPIYG
NYTPIDESSA ADRTITKEQA SLYAQYQIKL DQQWIGLIGG RMDWVDTENE SQKNAQRKSR
SDAEFSFNAG LMYLASNGVS PYLSYSQSFD VLSTIDSAKG ELYKPLKGEQ TEVGVKYQPE
FYDGYINLAW FDITQQNALV TNPTTFVATQ TGEMTAQGIE VESVGYVTDS LKLTASYTFT
DAKTDETGGK GTQQAGLIPK HQASAWLDYD AAQLGLQGWT FGSGVRYIGE SKDNPRSSDR
TVPSVTLVDL MAGYEITENW QVQLNINNLF DREFVSGCDY WCYYGQSRSA VLSANYRW
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