| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2579 |
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| Symbol | |
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| ID | 5137452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2730928 |
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| End bp | 2732763 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640534028 |
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| Product | putative hemolysin secretion ATP-binding protein |
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| Protein accession | YP_001218458 |
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| Protein GI | 147674646 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000689381 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTCATGT TCCAATGGTT TGAAAAACTG ACCGAACCTT TCCCGGCTCA AGAGCCGCAA
ACACCGCCTA AATCTTTGGT TGCTTTCTGT CGTTACTACA CGCAAGGCTT TGAAAAACCG
CTGTTATTGA TGTCGCTACT CAGCGCCTGC GTAGCGATGG CGGAAGTCAC TCTCGTACGT
TACATGGGGG AGATTGTTGA TATTCTCAGT ACTCAAGAGC GCCACCAGTT TTGGGAAATA
CACGGCGAAC GGCTGTGGAC GATGGCGGCA CTGGTACTGG TAGTGATGCC GATTCTGGCA
CTCGTACACT CGATGTTGCT GCATCAAACC ATTTTGGGTA ACTATCCGAT GTCGATCCGC
TGGTCGACTC ATCGCTATTT ACTCAAACAA AGTATCGGCT TCTTCCAACG TGATTTTGCT
GGGCGCGTTG CGACAAAAGT GATGCAAAAT GCGAATAGCG TGCGCGAAAC AGTGCTGAAA
TTGGTCGATC TGTCGGTCTA TATCGCGGTG TATATGGTGT CGATGCTGGT GATGATTGCC
GAGGCTGACA AAGTTTTGGT GGTGCCGATC CTCGTTTGGC TGCTCTTCTA TATCGCGATT
CAGGTCTACT TCGTACCCCG CTTGAAAACC ATTTCGACCG ATCAAGCCAA CGCACAATCG
CAAATGACTG GGCGGATTGT TGATACCTAC ACCAACATCA CCACCGTAAA GCTGTTCTCC
CACTCTCAAC GCGAAACCAC CTACGCAAAA TCGGGCATGA AGCAGTTTCT ACACACGGTT
TACCGCCAGA TGCGTACCTT AACCTCGCTT CTCTACAGTG TGGATCTGAT CAACTATCTG
TTGCTGTTTA GCATTGCTGC TCTCTCGATC CAGTTATGGC TCGCGGAAAC GGTCACCGTC
GGGGTGATCG CAATTGGTAT TACGATCGCG CTGCGCATGC AAGGCATGTC GAAGTGGATC
ATGTGGGAAA TTCGCGCTCT GTTTGAAAGC GTTGGCACCG TGATTGACAG CATGAACACC
ATAGCGAACC CAGTGGAAAT TGAGGATCGC CCACAAGCAA AATCGCTCCA AGTGAAATTT
GGTGAGCTGA GCTTCGCGCA AGTTCGTTTT GGTTACAGCG CGCAAAAAAC CGTGTTTGAT
AATCTAAACT TAGTGATTCA AGCCGGAGAA AAAGTCGGCA TTGTCGGCCG CTCTGGCGCA
GGCAAATCGA CGTTAGTCAA TCTACTGCTG CGCTTTTATG ATGTGCAAAG CGGCCAAATT
CAAATTGATG GGCAAGACAT TAGCCATGTT AGCCAAGAAT CGTTGCGCCG CCATATCGGC
ATGATCACCC AAGATACTTC ACTGCTGCAC CGCTCGATCC GCGATAACAT TTTGTACGGC
GACCCGGATG CCGATCAAGC CGCCATCGAA GAAGCCGCTC GCCAAGCGCA TGCTCATGAT
TTCATTCAGG AGTTGCACGA TGAACAAGGC CGCACTGGGT ATGATGTTCA AGTCGGTGAA
CGTGGCGTAA AACTGTCTGG CGGCCAGCGT CAACGTATTG CGATCGCACG CGTGCTCCTG
AAAAACGCGC CAATCTTGAT CATGGACGAA GCCACTTCCG CACTCGATTC TGAAGTGGAA
TCGGCCATTC AAGAGAATCT GCACACTCTG ATGGCAGGCA AAACCGTGAT TGCGATTGCG
CACCGTTTAT CGACAATTGC CGCGATGGAT CGGCTGATTG TGATGGATGA AGGGAAAATC
GTAGAGCAAG GTAGACATCA AGAACTACTG GCGCACAAAG GGATTTATGC CCAGTTATGG
GCGCACCAGA CCGGCGGTTT TATTGGCGAA GCCTAA
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| Protein sequence | MFMFQWFEKL TEPFPAQEPQ TPPKSLVAFC RYYTQGFEKP LLLMSLLSAC VAMAEVTLVR
YMGEIVDILS TQERHQFWEI HGERLWTMAA LVLVVMPILA LVHSMLLHQT ILGNYPMSIR
WSTHRYLLKQ SIGFFQRDFA GRVATKVMQN ANSVRETVLK LVDLSVYIAV YMVSMLVMIA
EADKVLVVPI LVWLLFYIAI QVYFVPRLKT ISTDQANAQS QMTGRIVDTY TNITTVKLFS
HSQRETTYAK SGMKQFLHTV YRQMRTLTSL LYSVDLINYL LLFSIAALSI QLWLAETVTV
GVIAIGITIA LRMQGMSKWI MWEIRALFES VGTVIDSMNT IANPVEIEDR PQAKSLQVKF
GELSFAQVRF GYSAQKTVFD NLNLVIQAGE KVGIVGRSGA GKSTLVNLLL RFYDVQSGQI
QIDGQDISHV SQESLRRHIG MITQDTSLLH RSIRDNILYG DPDADQAAIE EAARQAHAHD
FIQELHDEQG RTGYDVQVGE RGVKLSGGQR QRIAIARVLL KNAPILIMDE ATSALDSEVE
SAIQENLHTL MAGKTVIAIA HRLSTIAAMD RLIVMDEGKI VEQGRHQELL AHKGIYAQLW
AHQTGGFIGE A
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