| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2575 |
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| Symbol | rarD |
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| ID | 5137426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2727163 |
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| End bp | 2728071 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640534024 |
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| Product | rarD protein |
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| Protein accession | YP_001218454 |
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| Protein GI | 147673550 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.859473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTTCATGA CACCCGACCA ACAAGATGCC AAAAAAGGAA TTTTGCTCGC GATCAGCGTA
TACACCATGT GGGGCATTGC GCCGATTTAT TTCAAAGCAC TTGGCGCCGT ATCGGCGCTG
GAAATCCTTA GCCACCGGGT GGTGTGGTCA TTTGTGTTGC TCGCGGTTCT GATTCACCTC
GGTCGTCGTT GGCGCAGCGT CGTTGGCGTA GTACACACTC CGCGCAAATT TTGGCTGCTG
TTAGTGACCG CTTTGCTCGT GGGGGGTAAC TGGCTGATTT TTATCTGGTC AATCAACGCT
AACCATATGC TGGATGCCAG TTTGGGTTAC TACATTAATC CGCTACTCAA CGTGCTGCTC
GGCATGCTGT TTCTCGGCGA GCGCCTGCGT AAATTGCAGT GGTTTGCGGT CGCGCTTGCC
GCGATTGGCG TGGGCATTCA GTTAGTGGTG TTTGGCTCAG TGCCGATTGT GGCGATTGCC
CTTGCCACCA GCTTTGGTTT TTATGGTCTA CTGCGTAAAA AGATCCAAGT CGATGCGCAA
ACAGGCTTGT TCCTTGAAAC CCTGTTTATG CTGCCTGCCG CCGCCATCTA CCTAATCTGG
CTCGCCGATA CGCCAACCAG TGATATGGCA CTCAACACTT GGCAGCTCAA TCTGCTCTTG
GTTTGCGCTG GCGTCGTGAC TACCTTGCCC CTGCTCTGTT TTACCGGAGC CGCAGCGCGT
CTCAAACTCT CAACGCTTGG TTTTTTTCAA TATATCGGCC CGAGTTTGAT GTTTTTGCTC
GCAGTTTTGG TCTACGGTGA AGCCTTTACC AGCGATAAGG CGATCACCTT TGCTTTTATT
TGGAGTGCCT TGGTCATCTT CAGTGTTGAT GGGTTAAAAG CAGGACACGC CGCACGGCGT
GCACGTTAG
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| Protein sequence | MFMTPDQQDA KKGILLAISV YTMWGIAPIY FKALGAVSAL EILSHRVVWS FVLLAVLIHL
GRRWRSVVGV VHTPRKFWLL LVTALLVGGN WLIFIWSINA NHMLDASLGY YINPLLNVLL
GMLFLGERLR KLQWFAVALA AIGVGIQLVV FGSVPIVAIA LATSFGFYGL LRKKIQVDAQ
TGLFLETLFM LPAAAIYLIW LADTPTSDMA LNTWQLNLLL VCAGVVTTLP LLCFTGAAAR
LKLSTLGFFQ YIGPSLMFLL AVLVYGEAFT SDKAITFAFI WSALVIFSVD GLKAGHAARR
AR
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