| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2566 |
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| Symbol | |
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| ID | 5136056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2713701 |
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| End bp | 2714639 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640534015 |
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| Product | peptide ABC transporter, permease protein |
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| Protein accession | YP_001218445 |
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| Protein GI | 147673904 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCAG TATCGATCGC TCCTTCACGT TGGGAGCGCT TTAAGCAGTC CGATTTTCTC
TATTATTTCC TGCGCGACAA AGTGGCGATG AGCAGCTTTG CGGTGTTTGT GCTATTTGTC
ATCGTGGCAA TCAGCGCGCC CTTGATTGCG CCCACCAACC CGTACGATCT CTCGTCGATT
GATATTATGG ATGCAGAGCT TCCACCCTCA TGGATGGAAG GGGGCAATGA ACACTTTTTG
TTGGGCACCG ATGAGCAGGG GCGTGACATT TTCTCGACCA TTCTGTACGG CTCACGCTTA
TCACTGACCA TCGGCTTTTT GGCGGTGGGC CTACAACTGA CACTCGGCAT TGTGATTGGT
TTGTCGGCAG GCTATTTCGG TGGCCGAATT GATAGCTTTT TAATGCGTTT TGCCGATATT
CAGCTCTCAT TCTCCACCAT GATGGTGGCG ATCATTGTGT CGGCGATCTT TAAAGCCAGT
TTTGGTGGGG AGTTCTTCAG TCAATATGCG GTGGTGATGT TGGTGGTGAT CATCGGTGTG
GCGGAATGGC CACAATACGC GCGTACGGTG CGTGCTTCGG TGCTGGCGGA GAAGAAAAAA
GAGTATGTGG AAGCGGCACG CGTGATGGGC TTTAAAGCGC TGCGTATCAT GTTCCGCCAT
ATTCTGCCCA ACTGTTTATC ACCGATCCTG GTGATTTCAA CGGTACAGGT GGCAAACGCG
ATCATGTCAG AGGCGGCACT CTCCTTCCTT GGCTTAGGGT TACCGGTCGA TCAGCCGTCA
TTGGGCTCTC TGATCAGCAT CGGTTTTACC TACATTTTCT CGGGTGCATG GTGGATAACC
GCCTTTCCCG GGATTGTATT GGTATTGTTG GTATTAGTGA TTAACTTGCT TGGCGATTGG
TTGCGTGATG TGTTTAACCC GAAAATTTAC AAAGGGTAA
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| Protein sequence | MSAVSIAPSR WERFKQSDFL YYFLRDKVAM SSFAVFVLFV IVAISAPLIA PTNPYDLSSI
DIMDAELPPS WMEGGNEHFL LGTDEQGRDI FSTILYGSRL SLTIGFLAVG LQLTLGIVIG
LSAGYFGGRI DSFLMRFADI QLSFSTMMVA IIVSAIFKAS FGGEFFSQYA VVMLVVIIGV
AEWPQYARTV RASVLAEKKK EYVEAARVMG FKALRIMFRH ILPNCLSPIL VISTVQVANA
IMSEAALSFL GLGLPVDQPS LGSLISIGFT YIFSGAWWIT AFPGIVLVLL VLVINLLGDW
LRDVFNPKIY KG
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