| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2564 |
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| Symbol | |
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| ID | 5136450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2710938 |
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| End bp | 2712566 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640534013 |
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| Product | peptide ABC transporter, periplasmic peptide-binding protein |
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| Protein accession | YP_001218443 |
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| Protein GI | 147674667 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0172077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGTTGGC GATTGTTACA AAAGCAAATA CAACAAACTA GGGATCTGGA TTCCCGCATA
AGGAGTTATG CAATGAAAAC CATGAAAAAC AAACTGGCGT TGGCTTTGAT AGCGACTGGC
TTGAGTTTTG GTGCGATGGC AGCGGATATT ACCGTGGCTT ACGACGCTGA CCCGGTCTCA
ATGGACCCAC ATGAGCAGCT GTCAGGCGGT ACTCTGCAAC TGTCGCACAT GGTCTTTGAT
CCACTTATTC GCTTTACACA AAAAATGGAA TTTGAACCTC GTCTGGCCGA ATCTTGGCAG
CGTGTGGATA ACGAAACCAT GCGTTTCACT TTGCGCAAAG GCGTGAAGTT CCACTCTGGC
AATGATTTTA CCGCGGATGA TGTGGTATGG ACGTTCAATC GTTTGAAAGA ATCGGCGGAT
TTTAAAGGGA TTTTTGAACC TCTGGTCTCT TTGACTAAGG TGGATGATTA CACCATCGAA
ATCAAAACGG CTGGCACTTA CCCGCTGATT GAAAACGTGG CGACCTACAT TTTCCCGATG
GACAGCAAGT TCTACACCGG CACCACGGCG GATGGTAAAA ACAAAGCAGA AATAGTTAAG
CACGGTAACT CTTTCGCCTC TGAAAACATC TCTGGTACCG GGCCATTTAC GGTGACGGCT
CGTGAGCAAG GCGTGAAACT TGAGTTCCAA CGCAACCCTA ATTACTGGGA TAAAGCGTCG
AAAGGCAATG TGGACAAACT GACGCTGGCG GTGATTAAAG AAGATGCCAC TCGTGTTGCG
GCACTGCTGT CTGGCGGTGT GGATATGATT GCGCCGGTTT CACCGAATGA TTACCAACGC
ATCAAAGATG CGAAAGGCGT GGATCTCTTC ACTATGCCGG GCACTCGCGT GATTACCTTC
CAAATGAACC AAAATAGCAA CCCAGCGTTG AAAGATGTGC GTGTGCGTCA AGCGATTGTC
TACGCCATCA ACAACGAAGG GATTGTGGAT AAGGTCATGA AAGGGGCGGC TACCACGGCT
GCGCAGCAAA GCCCAGTCGG TTATGCCGGT TACAATGAGA ACCTAAAACC ACGCTTTGAT
CTCAACAAAG CGAAAGAGCT GATGAAAGAA GCAGGTTATG AGAAAGGCTT CAACCTGACC
ATGATCGCGC CAAACAACCG TTACGTGAAC GATGAAAAGA TCGCGCAAGC GGCATCGGCG
ATGTTGTCAA AAATCGGTAT TAAAGTTGAC CTAAAAACCA TGCCAAAAGC GCAATACTGG
CCTGAGTTTG ATAAATGTGC GGCAGATATG CTGATGATTG GTTGGCACCC AGATACCGAA
GACTCAGCAA ACTTTACTGA GTTCCTGACC ATGACCCGTG ATTCAAATAC GGGTAAAGGC
CAGTACAACT GTGGTTACTA CTCGAATGCG GAAGTCGATA AGTTAGTCAA TGCCGCGAAC
GAGGAAACCG ATCTAGAAAA ACGCAGCACC ATGCTGAAGA AAGTGGAAGA GATCCTGTAT
AACGAAGCGG CGTTTGTGCC TCTTCACTTC CAAGATCCGT CATGGGCCGC GAAAAATACG
CTCGATATCG CACCTATCAT CAACGGTATG GACTTCCCAT ACTTTGGCGA TCTGGTGGTG
AAAGAGTAA
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| Protein sequence | MGWRLLQKQI QQTRDLDSRI RSYAMKTMKN KLALALIATG LSFGAMAADI TVAYDADPVS
MDPHEQLSGG TLQLSHMVFD PLIRFTQKME FEPRLAESWQ RVDNETMRFT LRKGVKFHSG
NDFTADDVVW TFNRLKESAD FKGIFEPLVS LTKVDDYTIE IKTAGTYPLI ENVATYIFPM
DSKFYTGTTA DGKNKAEIVK HGNSFASENI SGTGPFTVTA REQGVKLEFQ RNPNYWDKAS
KGNVDKLTLA VIKEDATRVA ALLSGGVDMI APVSPNDYQR IKDAKGVDLF TMPGTRVITF
QMNQNSNPAL KDVRVRQAIV YAINNEGIVD KVMKGAATTA AQQSPVGYAG YNENLKPRFD
LNKAKELMKE AGYEKGFNLT MIAPNNRYVN DEKIAQAASA MLSKIGIKVD LKTMPKAQYW
PEFDKCAADM LMIGWHPDTE DSANFTEFLT MTRDSNTGKG QYNCGYYSNA EVDKLVNAAN
EETDLEKRST MLKKVEEILY NEAAFVPLHF QDPSWAAKNT LDIAPIINGM DFPYFGDLVV
KE
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