Gene VC0395_A2533 details

Gene Information

• Locus tag: VC0395_A2533
• Symbol: fadA
• ID: 5137249
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 2684792
• End bp: 2685955
• Gene Length: 1164 bp
• Protein Length: 387 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640533984
• Product: 3-ketoacyl-CoA thiolase
• Protein accession: YP_001218426
• Protein GI: 147674109
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0183] Acetyl-CoA acetyltransferase
• TIGRFAM ID: [TIGR01930] acetyl-CoA acetyltransferases; [TIGR02445] fatty oxidation complex, beta subunit FadA

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATACAG TAGTGATTGT TGATTGCCTA CGTACTCCGA TGGGACGCTC CAAAGGCGGT 
GCGTTTCGCC ACCAACGTGC GGAAGATCTT TCAGCACATT TGATGAAAGG CATTCTGGCG 
CGCAACCCAC AGGTCAATCC AAAAGAGATT GAAGACATTT ATTGGGGCTG TGTGCAGCAA 
ACCCTTGAAC AAGGCTTTAA CGTTGCGCGT AACGCAGCGC TGCTTGCGGG TCTGCCAATT 
GAGATTGGCG CGGTCACCGT CAACCGTTTG TGTGGATCGT CCATGCAAGC ACTGCATGAT 
GCGGCGCGCG CAATCATGGT TGGCGATGCA GAGATCTGTT TAGTGGGAGG CGTTGAGCAC 
ATGGGCCACG TGCCAATGAC TCACGGCGTT GATTTCCATC CGGGCCTGTC TAAGAACGTG 
GCCAAAGCAG CGGGAATGAT GGGACTGACC GCAGAGATGC TCGGCAAGCT GCATGGTATT 
AGCCGTCAGC AGCAAGATGA GTTCGCTGCG CGCTCTCATG CGCGTGCTCA TGCAGCAACA 
TTAGAAGGTC GCTTTAAAAA CGAGATTCTG CCCACCGAGG GGCATGCTGC CGATGGTACG 
CTGTTTACCC TAGATTACGA TGAAGTGATC CGCCCGGAAA CCACAGTGGC GGGATTAGCT 
GAACTGCGTC CCGTATTCGA TCCGGCCAAC GGAACTGTGA CTGCAGGAAC CTCTTCGGCA 
CTTTCGGATG GTGCTTCAGC GATGTTGGTG ATGAGTGAAC AGAAAGCCAA AGCACTCGGT 
TTAACCATTC GCGCTCGCAT TAAAGCGATG GCCGTGGCCG GTTGCGATCC TTCGATCATG 
GGTTACGGCC CAGTACCTGC GACCCATAAA GCGCTCAAAC GTGCGGGTTT AACCATGCAG 
GATATGGATG TGGTGGAATT GAACGAAGCG TTTGCCGCGC AATCTCTACC TTGCGCTAAA 
GACTTAGGCT TACTGGATAT GATGGATGAC AAGGTCAACC TCAATGGCGG CGCGATAGCG 
CTCGGTCATC CACTGGGTTG CTCGGGTACA CGTATCTCAA CCACGCTGAT CAATTTGATG 
GAAGCCAAAG ATGCGAAATA TGGCCTTGCT ACCATGTGTA TCGGCTTAGG TCAGGGTATC 
GCGACCATTT TTGAGCGCCC ATAA 

 

Protein sequence

MNTVVIVDCL RTPMGRSKGG AFRHQRAEDL SAHLMKGILA RNPQVNPKEI EDIYWGCVQQ 
TLEQGFNVAR NAALLAGLPI EIGAVTVNRL CGSSMQALHD AARAIMVGDA EICLVGGVEH 
MGHVPMTHGV DFHPGLSKNV AKAAGMMGLT AEMLGKLHGI SRQQQDEFAA RSHARAHAAT 
LEGRFKNEIL PTEGHAADGT LFTLDYDEVI RPETTVAGLA ELRPVFDPAN GTVTAGTSSA 
LSDGASAMLV MSEQKAKALG LTIRARIKAM AVAGCDPSIM GYGPVPATHK ALKRAGLTMQ 
DMDVVELNEA FAAQSLPCAK DLGLLDMMDD KVNLNGGAIA LGHPLGCSGT RISTTLINLM 
EAKDAKYGLA TMCIGLGQGI ATIFERP