Gene VC0395_A2529 details

Gene Information

• Locus tag: VC0395_A2529
• Symbol: atpC
• ID: 5136892
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 2680369
• End bp: 2680791
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640533980
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_001218422
• Protein GI: 147675059
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 53
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGCAA TAACCTTTCA TCTGGACGTA GTGAGCGCAG AGAAAAAACT GTTCTCTGGC 
TTGGTTGAAA CGTTTCAGGT GACCGGTAGC GAAGGTGAGC TGGGTATTTT CCACGGCCAT 
ACACCGCTGC TGACCGCTAT CAAGCCTGGT ATGGTGCGTA TTGTGAAACT GCACGGCCAC 
GAAGAGTACA TTTATGTCTC AGGTGGTATT GTTGAGGTTC AGCCGGGCAC AGCGACTGTG 
TTGGCCGATA CCGCAATCCG TGGAGAAGAT CTGGACGCAG CTAAGGCAGA AGAAGCCAAA 
CGTCGTGCGG AAGAGCGTAT TCTCAACCAG CATGGCGATA TGGACTTTGC ACAAGCGGCC 
AGTGAACTGG CTAAAGCCAT CGCGCAGCTT CGCGTGATTG AATTGACCAA AAAGCGTCGT 
TAA 

 

Protein sequence

MAAITFHLDV VSAEKKLFSG LVETFQVTGS EGELGIFHGH TPLLTAIKPG MVRIVKLHGH 
EEYIYVSGGI VEVQPGTATV LADTAIRGED LDAAKAEEAK RRAEERILNQ HGDMDFAQAA 
SELAKAIAQL RVIELTKKRR