| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2528 |
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| Symbol | atpD |
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| ID | 5136159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2678947 |
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| End bp | 2680350 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533979 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_001218421 |
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| Protein GI | 147674488 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACAG GTAAGATCGT ACAGATCATC GGTGCGGTAG TCGACGTAGA GTTCCCACAG
AGCGAAGTAC CAAGTGTTTA CGATGCTCTG AATGTTGTGG ATTCCAAAGA ACGTCTGGTT
CTGGAAGTTC AACAGCAGCT AGGCGGTGGC GTGATTCGCG CTATCGTTAT GGGTAGCTCG
GATGGTTTAC GTCGTGGAAT GACAGTACAA AACACTGGCG CTCCAATTTC AGTACCAGTA
GGTACTAAAA CCCTAGGTCG TATCATGAAC GTGCTTGGTG ATGCGATTGA CGAACGTGGC
GACATTGGCG CAGAAGAGGT GTACTCGATT CACCGTCCTG CTCCAAGCTA CGAAGAACAG
TCTAGTGCAA CTGAACTTTT GGAAACGGGT GTTAAGGTTA TCGACCTGAT CTGTCCGTTT
GCGAAAGGCG GTAAAATCGG TCTGTTCGGT GGTGCGGGTG TAGGTAAGAC CGTTAACATG
ATGGAACTTA TCAACAACAT CGCGCTACAG CACTCAGGTT TGTCAGTATT TGCTGGGGTA
GGTGAGCGTA CTCGTGAGGG TAACGACTTC TACCACGAAA TGCAGGAAGC GGGCGTTGTA
AACGTTGAAC AACCAGAACT GTCGAAAGTA GCGATGGTTT ACGGTCAGAT GAACGAGCCA
CCAGGCAACC GTCTGCGTGT AGCACTGACT GGTCTGACTA TGGCGGAAAA GTTCCGTGAT
GAAGGCCGTG ACGTACTGCT GTTTATCGAC AACATCTACC GTTACACCCT AGCGGGAACG
GAAGTATCTG CTCTGCTTGG CCGTATGCCT TCAGCGGTAG GTTACCAACC AACACTGGCT
GAAGAGATGG GTGTTCTGCA AGAACGTATC ACGTCAACCA AAAAAGGTTC TATCACCTCT
GTACAAGCGG TATACGTACC TGCGGATGAC TTGACTGACC CATCACCAGC AACCACGTTT
GCTCACTTGG ATGCAACTGT GGTTCTGAAC CGTAACATCG CCGCTATGGG TCTATACCCA
GCGATCGACC CACTGGATTC GACTTCACGT CAATTGGATC CACTGGTTGT TGGTCAAGAG
CACTACGATG TGGCGCGTGG CGTGCAAGCA ACGCTACAAC GCTATAAAGA GCTGAAAGAC
ATCATCGCGA TTCTAGGTAT GGACGAACTG TCTGAAGCGG ACAAGCAAGT CGTTGCTCGT
GCGCGTAAGA TCGAACGTTT CCTGACTCAG CCTTACCACG TAGCAGAAGT CTTTACTGGC
GATCCAGGGG TATACGTACC TCTGAAAGAA ACCCTGCGTG GTTTCAAAGG TCTGCTGGCA
GGTGACTACG ATGACATTCC AGAGCAAGCG TTTATGTACT GCGGTACGAT TGACGATGCT
ATCGAGAATG CGAAGAAGCT ATAA
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| Protein sequence | MATGKIVQII GAVVDVEFPQ SEVPSVYDAL NVVDSKERLV LEVQQQLGGG VIRAIVMGSS
DGLRRGMTVQ NTGAPISVPV GTKTLGRIMN VLGDAIDERG DIGAEEVYSI HRPAPSYEEQ
SSATELLETG VKVIDLICPF AKGGKIGLFG GAGVGKTVNM MELINNIALQ HSGLSVFAGV
GERTREGNDF YHEMQEAGVV NVEQPELSKV AMVYGQMNEP PGNRLRVALT GLTMAEKFRD
EGRDVLLFID NIYRYTLAGT EVSALLGRMP SAVGYQPTLA EEMGVLQERI TSTKKGSITS
VQAVYVPADD LTDPSPATTF AHLDATVVLN RNIAAMGLYP AIDPLDSTSR QLDPLVVGQE
HYDVARGVQA TLQRYKELKD IIAILGMDEL SEADKQVVAR ARKIERFLTQ PYHVAEVFTG
DPGVYVPLKE TLRGFKGLLA GDYDDIPEQA FMYCGTIDDA IENAKKL
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