Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2524 |
Symbol | atpF |
ID | 5135245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2675428 |
End bp | 2675898 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640533975 |
Product | F0F1 ATP synthase subunit B |
Protein accession | YP_001218417 |
Protein GI | 147674150 |
COG category | [C] Energy production and conversion |
COG ID | [COG0711] F0F1-type ATP synthase, subunit b |
TIGRFAM ID | [TIGR01144] ATP synthase, F0 subunit b |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00056725 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATATGA ACGCAACTCT GCTAGGTCAA GCAATTTCCT TTGGTATGTT TGTGTGGTTC TGCATGAAAT ATGTGTGGCC GCCGATTATC AAAGCGATTG AAGATCGTCA GAAGAAAATT GCTGATGGTT TGCAAGCCGC TGAGCGTGCA AAGAAAGATC TAGACCTGGC ACAAGCTAAT GCTTCAGATC AATTGAAAGA AGCAAAACGC ACAGCAACTG AGCTCATTGA GCAAGCGAAT AAACGTAAAG CACAAATCAT CGACGAAGCA CGTGAGGAAG CTCAGGCAGA ACGCCAGAAA ATCCTGACTC AAGCCGAAGC GGAGATTGAA GCAGAACGTA ACCGTGCTCG CGATGAGCTG CGTAAACAGG TTGCAACTCT GGCAATTGCT GGTGCTGAGA AAATTCTTGA GCGTTCAATC GATAAAGATA CGCACAAAGA TATTCTCGAC AACATTACTG CAAAACTTTA A
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Protein sequence | MNMNATLLGQ AISFGMFVWF CMKYVWPPII KAIEDRQKKI ADGLQAAERA KKDLDLAQAN ASDQLKEAKR TATELIEQAN KRKAQIIDEA REEAQAERQK ILTQAEAEIE AERNRARDEL RKQVATLAIA GAEKILERSI DKDTHKDILD NITAKL
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