Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2522 |
Symbol | atpB |
ID | 5136934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2674241 |
End bp | 2675053 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640533973 |
Product | F0F1 ATP synthase subunit A |
Protein accession | YP_001218415 |
Protein GI | 147673941 |
COG category | [C] Energy production and conversion |
COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000000145329 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGCGC CAGGTGAAGC GCTCACACCT TCCAGTTATA TCACTCACCA CCTTACTAAC CTTTCAACTT ACAAGTTGGG GCTAGTGGCG GAAGAGTCGA GTTTCTGGAA TGTACACATC GATAGCCTGT TCTTCTCTGT TTTAACTGGA CTGATATTCC TTGGAGTATT CCGTGCAGTA GCCAGAAAAG CGACAGCGGG TGTTCCGGGT AAGCTGCAGT GTGCTGTTGA GATGGTGGTA GAGTTCGTTG ACAAAAACGT CAAAGACACT TTCCATGGTC GCAATCCACT AATTGCTCCT TTGGCACTCA CTATCTTTTG TTGGGTATTT TTAATGAACT TGATGGACCT TGTGCCTATC GATTTCTTAC CTTACCCAGC ACAGCATTGG CTTGGTATCC CTTACCTAAA AGTGGTGCCG TCAGCTGATG TGAATATCAC CATGGCTATG GCTCTAGGCG TATTTGCTCT GATGATTTAC TACAGCATCA AAGTGAAAGG TCTGGGCGGG TTTGCAAAAG AGTTGGCACT ACACCCGTTT AATCACTGGA TCATGATTCC GTTCAACCTA TTGATTGAAG TTGTTTCGCT GCTGGCGAAA CCGCTATCAC TCGGTATGCG TCTGTTCGGT AACATGTTTG CAGGTGAAGT AGTGTTTATT CTTTGTGCGG CTATGCTGCC ATGGTACCTG CAATGGATGG GATCCCTACC TTGGGCTATC TTCCATATCT TGGTTATTTT GATCCAATCG TTTGTATTTA TGATGTTGAC CATTGTGTAT ATGTCAATGG CTCATGAAGA TAACGATCAT TAA
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Protein sequence | MAAPGEALTP SSYITHHLTN LSTYKLGLVA EESSFWNVHI DSLFFSVLTG LIFLGVFRAV ARKATAGVPG KLQCAVEMVV EFVDKNVKDT FHGRNPLIAP LALTIFCWVF LMNLMDLVPI DFLPYPAQHW LGIPYLKVVP SADVNITMAM ALGVFALMIY YSIKVKGLGG FAKELALHPF NHWIMIPFNL LIEVVSLLAK PLSLGMRLFG NMFAGEVVFI LCAAMLPWYL QWMGSLPWAI FHILVILIQS FVFMMLTIVY MSMAHEDNDH
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