Gene VC0395_A2518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2518 
SymbolgidB 
ID5135071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2671325 
End bp2671957 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content48% 
IMG OID640533969 
Product16S rRNA methyltransferase GidB 
Protein accessionYP_001218411 
Protein GI147673868 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 
TIGRFAM ID[TIGR00138] 16S rRNA methyltransferase GidB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000015126 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCGT TACGAGTCAA ACTCGACGCC TTGATCAGCA AAACCAGCTT AACGGTGACA 
GAGCAGCAAC GTGAGCAGCT CGTTGGGTAT GTGCAGCTGC TCGACAAATG GAACAAAGCT
TATAACCTCA CTTCCGTGCG GGATCCGATG GAAATGTTGG TGAAACACAT TCTTGATAGT
TTGGTGGTCA GTCCGCATCT TGTCGGTGAG CGCTTTATTG ATGTGGGTTC TGGGCCTGGA
TTGCCTGGTA TTCCGCTTGC GATCATGCAC CCAGATAAAG AGTTTGTGCT GCTCGATAGT
CTTGGTAAAC GGATCCGTTT TCTAAAACAG GTGATCCACG ATCTCAAGAT CAACAATGTG
TTACCCGTGC AGAGTCGAGT GGAAGAGTTT GATCCTGAAT CCGGTTTTGA TGGCGTATTA
AGTCGCGCTT TTGCGTCGAT GACCGACATG GTCAACTGGT GTCAGCATCT ACCAAAACCG
AATGCTGGGG TATTTTTAGC CCTCAAAGGA GTACGGCCTG ATGATGAAAT CACCCTACTC
CCTGAGTGGT GTTCTGTGAC CGATATCAAA GCTTTGCAAG TTCCTGAGTT GGAAGGTGAG
CGTCATCTTG TAATCTTATC GCGCAAGGGA TAA
 
Protein sequence
MNPLRVKLDA LISKTSLTVT EQQREQLVGY VQLLDKWNKA YNLTSVRDPM EMLVKHILDS 
LVVSPHLVGE RFIDVGSGPG LPGIPLAIMH PDKEFVLLDS LGKRIRFLKQ VIHDLKINNV
LPVQSRVEEF DPESGFDGVL SRAFASMTDM VNWCQHLPKP NAGVFLALKG VRPDDEITLL
PEWCSVTDIK ALQVPELEGE RHLVILSRKG