Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2518 |
Symbol | gidB |
ID | 5135071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2671325 |
End bp | 2671957 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640533969 |
Product | 16S rRNA methyltransferase GidB |
Protein accession | YP_001218411 |
Protein GI | 147673868 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000015126 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCCGT TACGAGTCAA ACTCGACGCC TTGATCAGCA AAACCAGCTT AACGGTGACA GAGCAGCAAC GTGAGCAGCT CGTTGGGTAT GTGCAGCTGC TCGACAAATG GAACAAAGCT TATAACCTCA CTTCCGTGCG GGATCCGATG GAAATGTTGG TGAAACACAT TCTTGATAGT TTGGTGGTCA GTCCGCATCT TGTCGGTGAG CGCTTTATTG ATGTGGGTTC TGGGCCTGGA TTGCCTGGTA TTCCGCTTGC GATCATGCAC CCAGATAAAG AGTTTGTGCT GCTCGATAGT CTTGGTAAAC GGATCCGTTT TCTAAAACAG GTGATCCACG ATCTCAAGAT CAACAATGTG TTACCCGTGC AGAGTCGAGT GGAAGAGTTT GATCCTGAAT CCGGTTTTGA TGGCGTATTA AGTCGCGCTT TTGCGTCGAT GACCGACATG GTCAACTGGT GTCAGCATCT ACCAAAACCG AATGCTGGGG TATTTTTAGC CCTCAAAGGA GTACGGCCTG ATGATGAAAT CACCCTACTC CCTGAGTGGT GTTCTGTGAC CGATATCAAA GCTTTGCAAG TTCCTGAGTT GGAAGGTGAG CGTCATCTTG TAATCTTATC GCGCAAGGGA TAA
|
Protein sequence | MNPLRVKLDA LISKTSLTVT EQQREQLVGY VQLLDKWNKA YNLTSVRDPM EMLVKHILDS LVVSPHLVGE RFIDVGSGPG LPGIPLAIMH PDKEFVLLDS LGKRIRFLKQ VIHDLKINNV LPVQSRVEEF DPESGFDGVL SRAFASMTDM VNWCQHLPKP NAGVFLALKG VRPDDEITLL PEWCSVTDIK ALQVPELEGE RHLVILSRKG
|
| |