Gene VC0395_A2517 details

Gene Information

• Locus tag: VC0395_A2517
• Symbol: gidA
• ID: 5135439
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 2669430
• End bp: 2671325
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640533968
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_001218410
• Protein GI: 147674621
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00000163342
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTTATC ACGAAACATT TGACGTCATT GTGGTTGGTG GCGGTCACGC AGGAACGGAA 
GCCGCTCTCG CTGCAGCACG TACAGGACAG CGTACGTTAC TTCTTACCCA CAATATTGAC 
ACCCTAGGCC AAATGTCCTG TAACCCTGCC ATTGGTGGGA TCGGTAAAGG TCATTTAGTC 
AAAGAAGTGG ATGCAATGGG CGGTTTGATG GCGCAAGCTA TCGATCACGC AGGTATTCAA 
TTTCGTACAC TGAACGCTTC AAAAGGGCCA GCCGTGCGTG CAACTCGTGC ACAAGCCGAT 
CGTGCTCTGT ACAAAGCCTA TGTGCGTAAT GTGTTAGAAA ACACCCCGAA TCTCACCCTG 
TTCCAACAAG CGGTAGATGA TGTGATCGTC GAGCATGATC ATATTCGTGG TGTTGTGACT 
CAGATGGGCC TGAAATTTCA TGCCAAAGCG GTAGTGTTAA CCGTCGGGAC TTTCCTTGGC 
GGTAAGATCC ATATCGGCCT TGAAAACTAT GCTGGGGGTC GTGCTGGGGA TCCACCATCG 
ATCGCTTTGG CGCACCGACT GCGTGAACTG CCATTTCGTG TTGATCGCTT AAAAACCGGC 
ACACCACCAC GTATCGATGC CAATAGCGTT GATTTCTCGG TATTGGAAGC GCAGCACGGT 
GATAATCCGA CCCCAGTTTT TTCCTTCATG GGCAAGCGTG AGCACCATCC ACGCCAAATT 
CCGTGTTACA TCACGCACAC CAATGAGCGC ACCCATGATG TGATCCGCGC TAACCTTGAT 
CGCAGCCCTA TGTATGCCGG GATCATCGAA GGGATCGGCC CGCGTTACTG TCCATCGATC 
GAAGATAAAG TGATGCGTTT TGCCGATAAA GACAGTCACC AAATTTTTAT TGAGCCAGAG 
GGTTTAACCA CCACTGAACT CTATCCGAAC GGCATTTCCA CCAGCTTGCC ATTTGACGTG 
CAAGTGCAGA TCGTACGTTC AATGAAAGGT TTTGAGAACG CACATATCGT TCGTCCGGGT 
TACGCGATTG AATACGACTT CTTCGATCCA CGTGATTTGA AGCAAACGTA TGAAACCAAA 
TATATCCATG GTTTGTTCTT TGCAGGACAA ATCAACGGTA CTACAGGTTA CGAAGAAGCC 
GCTGCGCAAG GCTTGATGGC GGGTCTGAAC GCCAGCTTGT ACAGCCAAGA CAAAGAAGGC 
TGGAGTCCAC GTCGCGATCA GGCGTACATG GGCGTGTTGA TCGACGATCT TTCGACCATG 
GGCACTAAAG AACCTTACCG TATGTTCACT TCGCGTGCGG AATATCGTCT GCTGCTGCGT 
GAAGACAACG CTGATCTGCG TTTGACCGAA AAAGCGCGTG AGCTTGGCCT TGTGGATGAT 
GCGCGTTGGG CACGTTTCAA CCAAAAAATC GACAACATGG CCAAAGAGCG TCAACGCTTA 
CAAGAAACTT GGATGAATCC AAACTCGGTT GGCGTCGAAC AGCTCAATAC CCTGCTGAAA 
ACGCCGATGT CGCGTGAAGC CAGTGGTGAA GACTTACTGC GTCGCCCTGA AATGACCTAT 
GAGCTGCTGA CCACTTTGCC GGCTTTTGCC CCTGCTTTGG AAGATGCAGA AGCCGCCGAA 
CAGGTAGAGA TTCAAGTTAA ATACGATGGC TACATTCAGC GCCAGCAAGA TGAAATTGAA 
AAATCGCTGC GCCATGAACA TACCAAGCTG CCAGCTGAGC TTGATTATAA GCAAGTCAAA 
GGTCTTTCAA ACGAGGTGGT ATTGAAGCTC AATGCGGCTA AACCAGAAAC CATTGGAATT 
GCATCACGTA TTTCAGGTAT CACGCCTGCG GCGATTTCTA TTTTGCTGGT TCACCTGAAA 
AAACACGGCA TGCTGAAAAA GGGAGAAGCG GCGTAA 

 

Protein sequence

MLYHETFDVI VVGGGHAGTE AALAAARTGQ RTLLLTHNID TLGQMSCNPA IGGIGKGHLV 
KEVDAMGGLM AQAIDHAGIQ FRTLNASKGP AVRATRAQAD RALYKAYVRN VLENTPNLTL 
FQQAVDDVIV EHDHIRGVVT QMGLKFHAKA VVLTVGTFLG GKIHIGLENY AGGRAGDPPS 
IALAHRLREL PFRVDRLKTG TPPRIDANSV DFSVLEAQHG DNPTPVFSFM GKREHHPRQI 
PCYITHTNER THDVIRANLD RSPMYAGIIE GIGPRYCPSI EDKVMRFADK DSHQIFIEPE 
GLTTTELYPN GISTSLPFDV QVQIVRSMKG FENAHIVRPG YAIEYDFFDP RDLKQTYETK 
YIHGLFFAGQ INGTTGYEEA AAQGLMAGLN ASLYSQDKEG WSPRRDQAYM GVLIDDLSTM 
GTKEPYRMFT SRAEYRLLLR EDNADLRLTE KARELGLVDD ARWARFNQKI DNMAKERQRL 
QETWMNPNSV GVEQLNTLLK TPMSREASGE DLLRRPEMTY ELLTTLPAFA PALEDAEAAE 
QVEIQVKYDG YIQRQQDEIE KSLRHEHTKL PAELDYKQVK GLSNEVVLKL NAAKPETIGI 
ASRISGITPA AISILLVHLK KHGMLKKGEA A