Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2513 |
Symbol | rnpA |
ID | 5136600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2664848 |
End bp | 2665204 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640533964 |
Product | ribonuclease P |
Protein accession | YP_001218406 |
Protein GI | 147674882 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0594] RNase P protein component |
TIGRFAM ID | [TIGR00188] ribonuclease P protein component, eubacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000000477039 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTACGT ACGCATTCAA TCGGGAGTTA CGTTTGTTAA CTCCCGAACA TTATCAAAAA GTCTTCCAGC AAGCTCACAG TGCTGGTTCT CCTCATCTCA CAATCATCGC TCGCGCTAAT AACCTTTCTC ATCCTCGTTT GGGACTCGCG GTTCCTAAAA AGCAGATCAA AACTGCCGTC GGCCGTAATC GATTCAAACG TATTTGCAGA GAAAGCTTTC GCTTACATCA AAATCAACTG GCTAACAAAG ATTTTGTTGT CATCGCCAAA AAGAGCGCGC AAGATTTGAG CAATGAAGAA CTGTTTAACT TGCTTGGCAA ACTATGGCAA CGCCTCTCTC GCCCTTCTCG TGGTTAG
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Protein sequence | MSTYAFNREL RLLTPEHYQK VFQQAHSAGS PHLTIIARAN NLSHPRLGLA VPKKQIKTAV GRNRFKRICR ESFRLHQNQL ANKDFVVIAK KSAQDLSNEE LFNLLGKLWQ RLSRPSRG
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