Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2510 |
Symbol | |
ID | 5137544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2663051 |
End bp | 2663722 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640533961 |
Product | amino acid ABC transporter, permease protein |
Protein accession | YP_001218403 |
Protein GI | 147675477 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000045662 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTTTG ACTTTCACTA CATGCTTGAG CTGCTGCCAA TCTTGCTCAA ATATCTGGGT ACGACTCTGG AAATGGCCAG CTGGGGGCTA GTTTTCGCGC TGATTTTGGC GCTGTTTCTA GCCAATATTC GGGTATTCAA AGTGCCAGTG TTGGATCCCC TTAGCCAGCT CTACATCAGT TTTTTCCGCG GAACGCCGCT GCTTGTACAG TTATTTTTGC TCTACTACGG TTTACCGCAA GTCTTCCCCC TGTTGGTTGG GCTTGATGCA TTCAGCGCTG CGGTGATCGG TTTAACGCTA CATTTTGCCG CTTACATGGC GGAAAGCATT CGCGCCGCGA TCATCGGTAT TGATCGCAGC CAAATGGAAG CCAGCTTATC CGTCGGAATG ACCACTTCTC AGGCGATGCG CCGGATCATT TTGCCACAAG CCACACGCGT TGCTCTGCCT TCATTGATGA ACTATTTCAT TGATATGATC AAATCAACCT CCCTCGCCTT TACCCTTGGC GTGGCTGAGA TCATGGCTAA AGCGCAGATG GAAGCTTCAT CCAGTTTCCG TTTTTTCGAA GCCTTCTTGG CGGTAGCCCT CATCTATTGG GTGGTGGTTT TGGTGCTCAC TCGCCTGCAA TCTTGGGCAG AGCAGAAACT CAATAAGGCG TACGCACGAT GA
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Protein sequence | MGFDFHYMLE LLPILLKYLG TTLEMASWGL VFALILALFL ANIRVFKVPV LDPLSQLYIS FFRGTPLLVQ LFLLYYGLPQ VFPLLVGLDA FSAAVIGLTL HFAAYMAESI RAAIIGIDRS QMEASLSVGM TTSQAMRRII LPQATRVALP SLMNYFIDMI KSTSLAFTLG VAEIMAKAQM EASSSFRFFE AFLAVALIYW VVVLVLTRLQ SWAEQKLNKA YAR
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