Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2506 |
Symbol | dnaN |
ID | 5135873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2659354 |
End bp | 2660454 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640533957 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_001218399 |
Protein GI | 147674757 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000000126636 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA CCATTGAACG TAGCCACTTG ATTAAACCAT TGCAGCAGGT GTCTGGCACT TTAGGTGGTC GCGCCAGCTT GCCGATCTTG GGTAATTTGT TGCTCAAGGT GGAAGAGAAT CAACTGTCGA TGACCGCCAC CGATTTGGAA GTGGAACTGA TCAGCCGTGT GACGTTAGAA GGTGAATTTG AAGCAGGCAG TATTACCGTT CCTGCGCGTA AGTTTTTAGA TATTTGCCGT GGTTTGCCCG ATAGTGCGGT GATCACTGTG CTGCTTGAAG GCGATCGCAT TCAAGTGCGT TCTGGTCGTA GCCGTTTCTC ACTCGCCACC TTACCTGCCA GTGATTTTCC GAACATTGAA GATTGGCAAA GTGAAGTGCA AGTTTCGCTC ACTCAAGCGG AACTGCGTGG CCTGATTGAG AAAACGCAGT TTTCTATGGC CAACCAAGAT GTACGCTACT ACTTAAACGG CATGCTGTTT GAAATTGATG GCACCACCTT GCGTTCTGTG GCGACTGATG GTCACCGTAT GGCGGTGGCG CAAGCTCAGC TCGGTGCGGA TTTTGCGCAA AAGCAGATCA TTGTGCCGCG TAAAGGGGTG CTTGAGCTGG TGAAATTGCT TGATGCGCCA GAGCAACCTG TGGTGCTGCA AATCGGCCAC TCTAACTTGC GTGCAGAAGT GAATCACTTT GTGTTTACTT CGAAGCTGGT TGATGGTCGT TTCCCTGATT ATCGCCGTGT ATTGCCGCAA CATACCAGCA AAACACTACA AACGGGCTGC GAAGAGTTAC GCCAAGCATT TTCGCGTGCC GCGATTCTAT CGAATGAAAA ATTCCGTGGT GTACGGGTTA ATTTGGCTGA CAACGGAATG CGCATTACCG CCAATAACCC AGAGCAAGAA GAAGCGGAAG AGCTACTGGA TGTGAGCTTT GAAGGCGAGC CGATTGAGAT TGGCTTTAAC GTCAGCTATA TCTTGGATGT GCTTAACACC CTGCGCTGCG ACAATGTGCG CGTTTCGATG TCGGATGCCA ACGCCAGTGC CTTGGTGGAG AATGTCGATG ATGACAGTGC CATGTACGTG GTCATGCCAA TTCGTCTGTA A
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Protein sequence | MKFTIERSHL IKPLQQVSGT LGGRASLPIL GNLLLKVEEN QLSMTATDLE VELISRVTLE GEFEAGSITV PARKFLDICR GLPDSAVITV LLEGDRIQVR SGRSRFSLAT LPASDFPNIE DWQSEVQVSL TQAELRGLIE KTQFSMANQD VRYYLNGMLF EIDGTTLRSV ATDGHRMAVA QAQLGADFAQ KQIIVPRKGV LELVKLLDAP EQPVVLQIGH SNLRAEVNHF VFTSKLVDGR FPDYRRVLPQ HTSKTLQTGC EELRQAFSRA AILSNEKFRG VRVNLADNGM RITANNPEQE EAEELLDVSF EGEPIEIGFN VSYILDVLNT LRCDNVRVSM SDANASALVE NVDDDSAMYV VMPIRL
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