Gene VC0395_A2505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2505 
SymbolrecF 
ID5136381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2658245 
End bp2659336 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content48% 
IMG OID640533956 
Productrecombination protein F 
Protein accessionYP_001218398 
Protein GI147675554 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0488541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCTTT CCCGGTTAAT GATCCAACAG TTTCGTAATA TTAAAGCCTG TGATATTCGC 
CTATCAGCAG GCTTTAACTT TCTTATCGGG CCGAATGGCA GCGGTAAAAC CAGCGTGCTT
GAAGCGATTT ATCTGCTCGG CCATGGCCGT TCATTTAAAA GCTCGCTGAC CGGACGGATC
ATTCAAAATG AGTGCTCAGA ACTGTTTGTG CATGGCCGGA TTTGTGAGCA TTCTTTGAGC
TCTGATCAAT TTGAGCTACC CGTTGGCATT AATAAGCAGC GTGACGGCTC AACTGAGGTT
AAAATAGGCG GCCAAACAGG GCAAAAATTG GCGCAATTAG CGCAGATTTT GCCACTGCAA
TTGATTCATC CGGAAGGCTT TGAACTGCTG ACCGATGGAC CGAAACAGCG TCGGGCTTTT
ATCGATTGGG GCGTGTTTCA TACTGAGCCC GCTTTTTTCG ATGCATGGGG GCGGTTTAAG
CGGCTCAGCA AGCAGCGTAA TGCACTGCTA AAAAGCGCGC AAAGCTATCG TGAACTCAGT
TATTGGGATC AAGAATTAGC CCGTTTGGCT GAGCAGATTG ACCAGTGGCG TGAAAGTTAC
GTCAATCAAT TGAAAAATGT GGCAGAGCAG TTATGTCGCA CATTTTTGCC AGAATTCGAT
ATCGACTTAA AGTATTATCG AGGTTGGGAA AAAGATCAGC CTTATCAATC GATTCTGGAA
AAAAACTTCG AACGGGATCA GCAGTTGGGC TATACCTTTA GCGGGCCTAA CAAAGCGGAT
TTGCGGATTA AAGTGAACGC AACCCCGGTG GAAGATGTGT TGTCGCGGGG ACAACTGAAG
TTGATGGTGT GTGCGTTGCG CGTGGCGCAA GGGCAGCACC TGACCGAGTT GACGGGAAAG
CAATGCATTT ATCTTATCGA TGATTTTGCT TCCGAATTGG ATAGCCTACG TCGCCAACGT
TTGGCAGATA GCCTAAAAGG GACGGGGGCG CAGGTTTTTG TAAGTTCTAT TACCGAAAGC
CAAGTGGCGG ACATGTTAGA TGAGTCCAGT AAAACATTTC ACGTTGCCCA CGGTGTAATA
GAGCAAGGAT AA
 
Protein sequence
MPLSRLMIQQ FRNIKACDIR LSAGFNFLIG PNGSGKTSVL EAIYLLGHGR SFKSSLTGRI 
IQNECSELFV HGRICEHSLS SDQFELPVGI NKQRDGSTEV KIGGQTGQKL AQLAQILPLQ
LIHPEGFELL TDGPKQRRAF IDWGVFHTEP AFFDAWGRFK RLSKQRNALL KSAQSYRELS
YWDQELARLA EQIDQWRESY VNQLKNVAEQ LCRTFLPEFD IDLKYYRGWE KDQPYQSILE
KNFERDQQLG YTFSGPNKAD LRIKVNATPV EDVLSRGQLK LMVCALRVAQ GQHLTELTGK
QCIYLIDDFA SELDSLRRQR LADSLKGTGA QVFVSSITES QVADMLDESS KTFHVAHGVI
EQG