Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2505 |
Symbol | recF |
ID | 5136381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2658245 |
End bp | 2659336 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640533956 |
Product | recombination protein F |
Protein accession | YP_001218398 |
Protein GI | 147675554 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0488541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCTTT CCCGGTTAAT GATCCAACAG TTTCGTAATA TTAAAGCCTG TGATATTCGC CTATCAGCAG GCTTTAACTT TCTTATCGGG CCGAATGGCA GCGGTAAAAC CAGCGTGCTT GAAGCGATTT ATCTGCTCGG CCATGGCCGT TCATTTAAAA GCTCGCTGAC CGGACGGATC ATTCAAAATG AGTGCTCAGA ACTGTTTGTG CATGGCCGGA TTTGTGAGCA TTCTTTGAGC TCTGATCAAT TTGAGCTACC CGTTGGCATT AATAAGCAGC GTGACGGCTC AACTGAGGTT AAAATAGGCG GCCAAACAGG GCAAAAATTG GCGCAATTAG CGCAGATTTT GCCACTGCAA TTGATTCATC CGGAAGGCTT TGAACTGCTG ACCGATGGAC CGAAACAGCG TCGGGCTTTT ATCGATTGGG GCGTGTTTCA TACTGAGCCC GCTTTTTTCG ATGCATGGGG GCGGTTTAAG CGGCTCAGCA AGCAGCGTAA TGCACTGCTA AAAAGCGCGC AAAGCTATCG TGAACTCAGT TATTGGGATC AAGAATTAGC CCGTTTGGCT GAGCAGATTG ACCAGTGGCG TGAAAGTTAC GTCAATCAAT TGAAAAATGT GGCAGAGCAG TTATGTCGCA CATTTTTGCC AGAATTCGAT ATCGACTTAA AGTATTATCG AGGTTGGGAA AAAGATCAGC CTTATCAATC GATTCTGGAA AAAAACTTCG AACGGGATCA GCAGTTGGGC TATACCTTTA GCGGGCCTAA CAAAGCGGAT TTGCGGATTA AAGTGAACGC AACCCCGGTG GAAGATGTGT TGTCGCGGGG ACAACTGAAG TTGATGGTGT GTGCGTTGCG CGTGGCGCAA GGGCAGCACC TGACCGAGTT GACGGGAAAG CAATGCATTT ATCTTATCGA TGATTTTGCT TCCGAATTGG ATAGCCTACG TCGCCAACGT TTGGCAGATA GCCTAAAAGG GACGGGGGCG CAGGTTTTTG TAAGTTCTAT TACCGAAAGC CAAGTGGCGG ACATGTTAGA TGAGTCCAGT AAAACATTTC ACGTTGCCCA CGGTGTAATA GAGCAAGGAT AA
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Protein sequence | MPLSRLMIQQ FRNIKACDIR LSAGFNFLIG PNGSGKTSVL EAIYLLGHGR SFKSSLTGRI IQNECSELFV HGRICEHSLS SDQFELPVGI NKQRDGSTEV KIGGQTGQKL AQLAQILPLQ LIHPEGFELL TDGPKQRRAF IDWGVFHTEP AFFDAWGRFK RLSKQRNALL KSAQSYRELS YWDQELARLA EQIDQWRESY VNQLKNVAEQ LCRTFLPEFD IDLKYYRGWE KDQPYQSILE KNFERDQQLG YTFSGPNKAD LRIKVNATPV EDVLSRGQLK LMVCALRVAQ GQHLTELTGK QCIYLIDDFA SELDSLRRQR LADSLKGTGA QVFVSSITES QVADMLDESS KTFHVAHGVI EQG
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