Gene VC0395_A2491 details

Gene Information

• Locus tag: VC0395_A2491
• Symbol: ilvD
• ID: 5137059
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 2642694
• End bp: 2644535
• Gene Length: 1842 bp
• Protein Length: 613 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640533942
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_001218384
• Protein GI: 147675499
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTAAGT ACCGTTCCGC CACCACCACA CACGGACGTA ACATGGCGGG TGCGCGCGCA 
TTATGGCGCG CCACCGGCGT CAAAGAGGAA GATTTTGGTA AACCGATCAT TGCGGTGGTC 
AACTCCTTCA CCCAATTTGT TCCCGGCCAT GTGCATTTAA AAGATCTCGG CCAACTGGTC 
GCACGCGAAA TTGAAGCCGC GGGCGGCATT GCCAAAGAAT TCAACACCAT TGCGGTCGAT 
GACGGCATCG CCATGGGCCA CGGCGGCATG CTCTACTCGC TGCCATCGCG TGAACTGATC 
GCCGATTCCG TCGAATACAT GGTCAATGCG CACTGCGCCG ATGCCATGGT GTGTATCTCC 
AACTGTGACA AAATCACTCC AGGAATGCTG ATGGCGGCGA TGCGCCTTAA TATTCCGGCG 
ATTTTCGTCT CTGGCGGCCC GATGGAAGCG GGAAAAACCA AGCTTTCTGA CCAAATCATC 
AAGCTCGACT TGGTCGATGC CATGATGCAA GGCGCTGACC CCAAAGTATC GGATGCCCAA 
AGTGAGCAGA TTGAACGCTC GGCCTGTCCT ACTTGTGGCT CTTGCTCGGG GATGTTTACC 
GCCAACTCAA TGAACTGCTT GACCGAAGCG CTGGGTCTCT CTCAGCCGGG TAACGGCTCA 
CTGCTCGCCA CGCATGCCGA TCGCAAACAG CTGTTTTTGA CTGCTGGGCA ACGGATTGTT 
GAGCTGACTA AACGTTACTA CGAGCAAGAT GATGCCTCAG TTTTGCCACG CAACATTGCC 
AACAAAGCAG CGTTTGAAAA CGCCATTGCG CTGGATATTG CGATGGGCGG CTCCACCAAC 
ACGGTGTTAC ACCTGTTGGC CGCTGCGCAG GAAGGCGAAG TGGAATTTGA TATGACCGAT 
ATCGATCGCA TGTCTCGCCA AGTGCCACAC TTATGTAAAG TCGCGCCTTC CACTCAGAAA 
TACCATATGG AAGATGTACA CCGCGCGGGC GGTGTAATGG GCATTTTGGG TGAGCTACAA 
CGTGCAGGTC TACTCAAGGA TCAAACCCGC ACCGTACTAG GCATCTCGCT GCAAGAGCAG 
CTGGCGCAAT ACGACGTGAA ACAAACCCAA GATCCAGCGG TACATACTAT GTTCCGCGCA 
GGCCCTGCTG GCATTCGCAC CACTCAAGCT TTCTCACAAG ATTGCCGTTG GGATACGCTC 
GATGACGATC GCCAAGAGGG GTGTATTCGC GATAAAGCGC ACGCATTCAG TCAAGATGGT 
GGCCTTGCCG TACTCAAAGG CAACTTGGCG ATTGACGGCT GCATCGTAAA AACTGCTGGC 
GTGGATGAAA GTATCCTCAA ATTCCGTGGT CCTGCTGTGG TGTATGAAAG TCAGGAAGAC 
GCGGTCAACG GCATTCTTGG CGGCCAAGTC AAAGCCGGTG ACGTCGTGGT TATTCGTTAT 
GAAGGGCCAA AAGGCGGTCC GGGCATGCAA GAGATGCTCT ACCCAACCAC CTACCTCAAA 
TCGATGGGAC TGGGTAAACA GTGCGCGCTA CTGACCGATG GCCGCTTCTC CGGTGGTACG 
TCCGGCTTGT CGATTGGTCA CGCCTCTCCG GAAGCGGCGA ATGGCGGTAC GATCGGCTTG 
GTACGCAGTG GCGATAGCAT CGCGATTGAT ATTCCCAACC GTTCGATCAC GCTCGAAGTC 
AGCGAATCTG AGCTAGCAGC TCGCCGCGCT GAACAAGATA AACTCGGCTG GAAACCAGTG 
GATCGCCAGC GTACCGTTTC TTTGGCGCTG AAAGCTTATG CCAGCATGGC AACCAGCGCC 
GACAAAGGTG CAGTGCGCGA TAAGTCCAAA CTTGAGGGCT AA 

 

Protein sequence

MPKYRSATTT HGRNMAGARA LWRATGVKEE DFGKPIIAVV NSFTQFVPGH VHLKDLGQLV 
AREIEAAGGI AKEFNTIAVD DGIAMGHGGM LYSLPSRELI ADSVEYMVNA HCADAMVCIS 
NCDKITPGML MAAMRLNIPA IFVSGGPMEA GKTKLSDQII KLDLVDAMMQ GADPKVSDAQ 
SEQIERSACP TCGSCSGMFT ANSMNCLTEA LGLSQPGNGS LLATHADRKQ LFLTAGQRIV 
ELTKRYYEQD DASVLPRNIA NKAAFENAIA LDIAMGGSTN TVLHLLAAAQ EGEVEFDMTD 
IDRMSRQVPH LCKVAPSTQK YHMEDVHRAG GVMGILGELQ RAGLLKDQTR TVLGISLQEQ 
LAQYDVKQTQ DPAVHTMFRA GPAGIRTTQA FSQDCRWDTL DDDRQEGCIR DKAHAFSQDG 
GLAVLKGNLA IDGCIVKTAG VDESILKFRG PAVVYESQED AVNGILGGQV KAGDVVVIRY 
EGPKGGPGMQ EMLYPTTYLK SMGLGKQCAL LTDGRFSGGT SGLSIGHASP EAANGGTIGL 
VRSGDSIAID IPNRSITLEV SESELAARRA EQDKLGWKPV DRQRTVSLAL KAYASMATSA 
DKGAVRDKSK LEG