Gene VC0395_A2490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2490 
SymbolilvE 
ID5135891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2641725 
End bp2642684 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content54% 
IMG OID640533941 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_001218383 
Protein GI147674119 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCATAA GGAAGGCAAT CATGGCAACA AAAACTGCTG ATTATATTTG GTTCAATGGC 
GAGATGATCC CATGGGCGAA TGCGACCGTT CACGTACTCA CCCATGCAAT GCACTACGGC
ACTTCGGTGT TTGAAGGTGT TCGCTGCTAC AACACCCCAA AAGGCCCTAT CATCTTCCGC
CATCGCGAAC ACGCGCAGCG CCTGCTTGAT TCAGCCAAAA TCTACCGCTT TCCAATCCCT
TATTCGATCG AGACCATCAT GGAAGCGACG CGCGAAACCT TACGCGTCAA CAAACTCGAT
AACGCTTACA TTCGCCCATT GGCGTATGTG GGTAACGTGG GTCTTGGCGT GTGCCCGCCA
GTCGGCACTG AAATGGATCT GATGATTGCC GCTTTCCCTT GGGGGGCTTA CCTCGGTGAA
GAAGCGCTAG AAAATGGCGT GGATGCCATG GTTTCAAGCT GGCATCGTGC GGCACCGAAC
ACCATTCCAA CCGCGGCAAA AGCTGGCGGT AATTACCTAT CTTCTCTACT GGTTGGTGGC
GAAGCACGTC GCCACGGTTA CGCGGAAGGC ATTGCGCTGA GTGTGGATGG TTATCTCTCT
GAAGGCGCAG GCGAAAACAT TTTCGTGGTG AAAAACGGCG TGATCCTGAC CCCACCGACC
ACCAGCTCTA TCCTGCCGGG TATCACCCGT GATTCGATCA TGACGCTGGC ACGCGACATG
GGTTATGAAG TGCGCGAAGC CAACATCTCC CGTGAAGCGC TCTATCTGGC CGATGAAATT
TTCATGACAG GTACCGCCGC CGAAGTGGTT CCCGTGCGTA GCGTGGATAA GATTACCGTA
GGCGCAGGCA AGCGCGGCCC CATCACCAAG GTAGTACAAG ATGCTTACTT TGGTCTGTTC
AAAGGCACCA CAGAAGATAA GTGGGGCTGG TTGGATTACG TTTACCCAGC AGCGAAGTAA
 
Protein sequence
MRIRKAIMAT KTADYIWFNG EMIPWANATV HVLTHAMHYG TSVFEGVRCY NTPKGPIIFR 
HREHAQRLLD SAKIYRFPIP YSIETIMEAT RETLRVNKLD NAYIRPLAYV GNVGLGVCPP
VGTEMDLMIA AFPWGAYLGE EALENGVDAM VSSWHRAAPN TIPTAAKAGG NYLSSLLVGG
EARRHGYAEG IALSVDGYLS EGAGENIFVV KNGVILTPPT TSSILPGITR DSIMTLARDM
GYEVREANIS REALYLADEI FMTGTAAEVV PVRSVDKITV GAGKRGPITK VVQDAYFGLF
KGTTEDKWGW LDYVYPAAK