Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2486 |
Symbol | |
ID | 5137307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2636761 |
End bp | 2637645 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640533937 |
Product | putative acyltransferase |
Protein accession | YP_001218379 |
Protein GI | 147673368 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.400705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGGCTT ACTTGCTCCT TACGCTGAAT GTGACCGTGG TGGTGTTAAA TTCGGCCTTT CATTCGCTGC TGATCTGCTT GATTGCGTTG ATTAAACTTT TGCTGCCGTC AGCCGCATGG AAAGCGCAGG CCACGCAAGC GGCGAATTGG GTGATGTGGT CATGGGCGAG TGTGAACGCT TGGGTTTTGC AGCTTTCCAA CCGCGTGGAA TGGGATATTC AAGGCGGTGA AACCCTGACT AAGCAGGGAT GGTATCTGCT GATTTCCAAT CACTTGAGTT GGACGGATAT TGTGGTGCTG TGCTGCGTGT TTAAAGACCG CATTCCAATG CCGAAATTTT TCCTCAAGCA GCAACTGTTG TATGTGCCTT TCATTGGTAT GGCGTGTTGG GCGCTGGATA TGCCGTTTAT GCGCCGCTAT TCGCGTGAGT ATCTGCTGCG CCATCCGCAC AAACGTGGCC AAGATTTAGC GACGACGCGC CGTTCGTGCG AAAAATTCCG CGCCGTGCCT ACCACTGTCG TGAATTATGT GGAAGGGACA CGTTTTAATT CACAGAAGCA GCAACGTAGC GGCGTGGGAT ATCAGCATGT ATTGCAGCCG AAAACCGGTG GTATTGCCTA CACGTTAGCC GCCATGGGTG AGCAGTTCGA GCATATTATT GATGTGACTT TGGCCTATCC GGATAACCGT CAACAACCGT TTCGTGATTT ATTGATGGGT CGTATGCAGC GAATTGTGGT GCACATTGAT TTGCTACCGG TGGATGAACA GGTGCAAGGT GATTACTTCA ACGATAAGCA GTTTAAGCGT CAGTTTCAGC TCTGGCTGAG CGAGGTGTGG CAGCGTAAAG ATCAGCGATT AGAGCAGATT TACAAAGCCG ATTAG
|
Protein sequence | MLAYLLLTLN VTVVVLNSAF HSLLICLIAL IKLLLPSAAW KAQATQAANW VMWSWASVNA WVLQLSNRVE WDIQGGETLT KQGWYLLISN HLSWTDIVVL CCVFKDRIPM PKFFLKQQLL YVPFIGMACW ALDMPFMRRY SREYLLRHPH KRGQDLATTR RSCEKFRAVP TTVVNYVEGT RFNSQKQQRS GVGYQHVLQP KTGGIAYTLA AMGEQFEHII DVTLAYPDNR QQPFRDLLMG RMQRIVVHID LLPVDEQVQG DYFNDKQFKR QFQLWLSEVW QRKDQRLEQI YKAD
|
| |