| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2476 |
|---|
| Symbol | trkA |
|---|
| ID | 5137809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 2627392 |
|---|
| End bp | 2628768 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640533927 |
|---|
| Product | potassium transporter peripheral membrane component |
|---|
| Protein accession | YP_001218369 |
|---|
| Protein GI | 147674709 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA TCATTCTTGG TGCAGGACAA GTCGGCGGTA CGCTCGCTGA AAACTTGGTA
GGCGAAAACA ACGACATTAC TGTGGTCGAT AAAAACGCTG ACCGACTGCG CGATTTACAA
GATAAATATG ATTTGCGTGT AGTCAATGGT CACGCCAGCC ACCCTGATGT GCTGCGCGAA
GCTGGCGCAC AAGATGCTGA CATGCTGGTC GCGGTCACCA ATACCGATGA AACCAACATG
GCCGCTTGTC AGGTCGCCTT TACTCTGTTT AACACGCCCA ACCGGATTGC GCGTATCCGC
TCTCCACAAT ATCTCGCTGA AAAAGAAGCG CTGTTTCAAT CTGGCGCGGT CCCGGTCGAT
CACCTGATTG CACCGGAAGA ACTGGTCACC AGCTATATCG AGCGCTTGAT CCAGTATCCG
GGCGCGCTGC AAGTGGTGAG TTTCGCCGAA GAAAAAGTCA GCTTGGTGGC CGTTAAAGCG
TATTACGGTG GTCCACTGGT TGGTAACGCC CTTTCTGCCC TACGCGATCA CATGCCGCAC
ATCGATACTC GCGTGGCAGC GATTTTCCGT CAGGGACGCC CAATTCGTCC GCAAGGCACC
ACCATTATTG AAGCGGATGA TGAAGTGTTT TTCGTCGCCG CGAGTAACCA TATTCGCTCG
GTGATGAGTG AGTTGCAGCG CCTTGAAAAA CCGTATCGTC GGATCATGAT TGTCGGCGGC
GGTAACATAG GTGCCAGCCT CGCTAAACGC CTAGAGCAAA CTTACAGCGT TAAGCTGATT
GAACATAATT ACCAACGTGC GGAACAGTTA TCTGAACAGT TGGAAAATAC CATCGTCTTT
TGTGGAGATG CCGCGGACCA AGAGCTGCTG TCGGAAGAGA ATATCGATCA GGTCGATGTG
TTTATCGCCC TCACCAATGA AGATGAAACC AACATCATGT CGGCCATGCT TGCCAAACGC
ATGGGAGCCA AGAAAGCCAT GGTGCTTATC CAACGCAGCG GCTATGTCGA TTTAGTCCAA
GGCGGTGTGA TTGATGTAGC GATCTCCCCG CAGCAAGCGA CCATTTCTGC GCTACTCACT
CACGTGCGCC GCGCCGATAT TGTCAACGTC TCTTCATTAC GCCGTGGAGC GGCAGAAGCC
ATTGAAGCGA TTGCCCATGG CGATGAATCA ACCTCTAAGG TAGTAGGACG AGCGGTGGGC
GATATTAAAC TGCCTCCGGG CACGACAATT GGCGCTATTG TGCGGGGCGA AGAAGTGCTG
ATTGCCCATG ACCGCACTGT CATCGAGCAA GACGATCACG TCGTCATGTT CTTGGTCGAT
AAAAAATATG TGCCCGACGT GGAAACGCTA TTCCAGCCGA GCCCATTCTT CTTGTAA
|
|---|
| Protein sequence | MKIIILGAGQ VGGTLAENLV GENNDITVVD KNADRLRDLQ DKYDLRVVNG HASHPDVLRE
AGAQDADMLV AVTNTDETNM AACQVAFTLF NTPNRIARIR SPQYLAEKEA LFQSGAVPVD
HLIAPEELVT SYIERLIQYP GALQVVSFAE EKVSLVAVKA YYGGPLVGNA LSALRDHMPH
IDTRVAAIFR QGRPIRPQGT TIIEADDEVF FVAASNHIRS VMSELQRLEK PYRRIMIVGG
GNIGASLAKR LEQTYSVKLI EHNYQRAEQL SEQLENTIVF CGDAADQELL SEENIDQVDV
FIALTNEDET NIMSAMLAKR MGAKKAMVLI QRSGYVDLVQ GGVIDVAISP QQATISALLT
HVRRADIVNV SSLRRGAAEA IEAIAHGDES TSKVVGRAVG DIKLPPGTTI GAIVRGEEVL
IAHDRTVIEQ DDHVVMFLVD KKYVPDVETL FQPSPFFL
|
|---|
| |