| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2471 |
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| Symbol | |
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| ID | 5137232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2622138 |
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| End bp | 2623253 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533922 |
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| Product | Smf/DprA family protein |
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| Protein accession | YP_001218364 |
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| Protein GI | 147675247 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATC AGGATTTAGC GGCATGGTTG GCGCTCTGTT TTACTCCTAA ACTAGGCAGC
AAAACCATTT CTCACCTGCT TGCGACCCGT TTGCCAGCCC AGTTGCAAAG TTTTACGCCT
AAGCAATGGT TGGCCTGCGG GCTTAAGCCC GAACAACTGG TGTTTTTAAC CACTCAAGCG
GCTAAACAAG CCGAGCAGTG TTTGCAATGG CGATCAGCAG CCAATAACCG CTATATCGTC
ACTCCTCATT GCCCGCTTTA CCCTCGTTTA TTGAAAGAGA TTAACTCATC GCCTCCCGTC
CTGTTTATTG AAGGAATATG GGAAGCGGTG CATGACCCTG CGGTGGCTAT CGTCGGTAGC
CGCAATGCCA GTGTTGATGG GCGGCAGATC GCTCGCCAGT TTGCCACTGA GCTCGCGCAG
TCAGGTTTAG TGGTCACCAG TGGTTTAGCG CTTGGTATTG ATGGCTATGC GCACGATGGC
GCTTTGCAAG CACAAGGGCA AACCGTAGCA GTATTAGGTT CAGGGCTGGC GCAGGTTTAC
CCCAAACAGC ATCAAGGGTT AGCGGAGCGA ATCATCGCCC AAGGGGCCTT GGTTTCTGAG
TTTGCCCCTC ACACACCGCC TAAAGCCGAT CACTTTCCGC GCCGTAACCG AATTATCAGC
GGCTTATCGC TCGGTGTTGT GGTGGTAGAA GCTGCGGAGA AAAGCGGCTC ACTCATCACT
GCACGCTACG CGGCTGAGCA AGGGCGTGAG GTCTTTGTGG TTCCCGGATC AATTTTTAAT
GCCGCCAGCC AAGGTAGCAA CCAATTGATT CGCCAAGGCG CTTGTTTGGT GCAAAGTGTG
CAACAAATTC ATCAAGAGCT CAAAAATGCG CTGACTTGGT CACTCTCTGA ACAAGTTCCT
TATCAAGCAA CACTTTTTTC TGCTGTACAG AGCGATGAAG AATTGCCATT TCCCGAGCTG
TTAGCTAACG TAGGAATAGA AGCTACACCT ATTGATATTC TCGCAAGCCG GACCCAGATA
CCGGTGCAAG ATATCATGAT GCAGCTCTTG GAGCTTGAGC TCCTTGGGCA TGTGGTTGCA
GTACCTGGTG GCTATATTAG AAAGGGGAGA GGCTAG
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| Protein sequence | MKDQDLAAWL ALCFTPKLGS KTISHLLATR LPAQLQSFTP KQWLACGLKP EQLVFLTTQA
AKQAEQCLQW RSAANNRYIV TPHCPLYPRL LKEINSSPPV LFIEGIWEAV HDPAVAIVGS
RNASVDGRQI ARQFATELAQ SGLVVTSGLA LGIDGYAHDG ALQAQGQTVA VLGSGLAQVY
PKQHQGLAER IIAQGALVSE FAPHTPPKAD HFPRRNRIIS GLSLGVVVVE AAEKSGSLIT
ARYAAEQGRE VFVVPGSIFN AASQGSNQLI RQGACLVQSV QQIHQELKNA LTWSLSEQVP
YQATLFSAVQ SDEELPFPEL LANVGIEATP IDILASRTQI PVQDIMMQLL ELELLGHVVA
VPGGYIRKGR G
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