| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2468 |
|---|
| Symbol | purK |
|---|
| ID | 5137360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 2619871 |
|---|
| End bp | 2621004 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640533919 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
|---|
| Protein accession | YP_001218361 |
|---|
| Protein GI | 147674298 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
|---|
| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.599362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTGT TGGTTCTCGG CGCTGGTCAG CTGGCGCGCA TGATGTCGCT CGCCGGAGCA
CCGCTCAATA TTGAAACGAT CGCTTTTGAT GTGGGTAGCG AAAACATTGT GCACCCCTTA
ACGCAAACTG TGCTTGGGCA TGGATTGGAG CAAGCGATTG AACAAGTCGA TGTGATCACC
GCTGAGTTTG AACACATTCC GCATCCGATC CTCGATCTCT GTGCACGCAG TGGCAAACTT
TACCCAAGCG CTGAAGCTAT CAAAGCTGGC GGCGATCGTC GTTTAGAAAA AGCCTTGCTG
GATCGCGCCC AAGTGGCGAA TGCACGTTAT ACGATGATCC GCAGCCGAGA CGACCTAACC
TCAGCCATCG CCGAGATTGG ATTGCCTATG GTGCTGAAAA GTGCACTCGG AGGCTACGAT
GGAAAAGGCC AATGGCGCTT GAAAGAACCA ACGCAGATCG AATCGGTTTG GCAAGAACTT
GCGCAATATC TGGCAGCCAA CCCCGAACAA GCAATTGTGG CAGAAGAATT TGTCGCTTTT
GATCGCGAAG TGTCACTGGT CGGTGCACGT AACCTAGTCG GCGATGTTGT GGTGTATCCT
TTAGCGGAGA ACGTTCATAC CCAAGGTGTG TTGAGCCTTT CTACCGCCAT TGATGCTCCT
GCGCTACAAA CTCAAGCGAA AGCCATGTTT AAAGCGGTAG CCGAGCAGCT CAATTATGTC
GGTGTATTAG CGCTGGAGTT TTTTGAAGTA CAAGGCCAGT TACTGGTCAA TGAAATTGCA
CCACGAGTTC ATAACTCCGG TCACTGGACT CAGCAAGGTG CGGAAACCTG TCAGTTCGAA
AACCACTTAC GCGCAGTGTG TGGCTTACCG CTGGGTAGCA CCAAACTGGT TCGTGAGACC
GCGATGATTA ATATTCTTGG TGAAGATCAG CTGCCCGCAG AAGTATTGGC ACTGGAAGGC
TGCCACGTAC ATTGGTACGG CAAGGCCAAG CGCTCAGGAC GCAAGATGGG GCATATCAAT
GTGACCGCCG ATTACAGTGG TGAGTTGCAA CGCAAATTAT GCCAATTAGC GACTGTGTTA
GATGAAAAGG CTTTTCCTGC CGTACACGCC GTAGCAAAGG AAATTCAGCC TTAA
|
|---|
| Protein sequence | MRVLVLGAGQ LARMMSLAGA PLNIETIAFD VGSENIVHPL TQTVLGHGLE QAIEQVDVIT
AEFEHIPHPI LDLCARSGKL YPSAEAIKAG GDRRLEKALL DRAQVANARY TMIRSRDDLT
SAIAEIGLPM VLKSALGGYD GKGQWRLKEP TQIESVWQEL AQYLAANPEQ AIVAEEFVAF
DREVSLVGAR NLVGDVVVYP LAENVHTQGV LSLSTAIDAP ALQTQAKAMF KAVAEQLNYV
GVLALEFFEV QGQLLVNEIA PRVHNSGHWT QQGAETCQFE NHLRAVCGLP LGSTKLVRET
AMINILGEDQ LPAEVLALEG CHVHWYGKAK RSGRKMGHIN VTADYSGELQ RKLCQLATVL
DEKAFPAVHA VAKEIQP
|
|---|
| |