Gene VC0395_A2467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2467 
SymbolpurE 
ID5136780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp2619382 
End bp2619867 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content53% 
IMG OID640533918 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_001218360 
Protein GI147675401 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0540606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGTCG GTATTATCAT GGGTTCCAAG TCAGACTGGC CAACCATGAA ACACGCAGCA 
GAGATGCTTG ACCAGTTTGG TGTGGCTTAC GAGACTAAAG TGGTTTCTGC GCACCGAACT 
CCTCATCTTT TGGCCGACTA TGCCTCTAGC GCCAAAGAAC GCGGTTTACA AGTGATCATC 
GCTGGAGCGG GCGGCGCTGC GCATCTTCCC GGAATGACCG CCGCATTCAC TAGCTTGCCA 
GTGTTAGGCG TGCCCGTTCA ATCTCGCGCT CTGTCTGGGC TCGACTCGTT ATACTCCATT 
GTGCAGATGC CAAAAGGCAT TGCGGTGGGT ACGCTCGCCA TTGGTGAAGC TGGTGCCGCT 
AATGCAGGAT TACTTGCCGC ACAAATCATC GGCATTCATA ACCCAGAAGT GATGAGTAAA 
GTGGAAGCTT TCCGCGCTAA GCAGACTCAA TCTGTGTTGG ATAACCCAAA TCCGGCTGAG 
GAGTAA
 
Protein sequence
MTVGIIMGSK SDWPTMKHAA EMLDQFGVAY ETKVVSAHRT PHLLADYASS AKERGLQVII 
AGAGGAAHLP GMTAAFTSLP VLGVPVQSRA LSGLDSLYSI VQMPKGIAVG TLAIGEAGAA 
NAGLLAAQII GIHNPEVMSK VEAFRAKQTQ SVLDNPNPAE E