| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2465 |
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| Symbol | hemF |
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| ID | 5136536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2617722 |
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| End bp | 2618639 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533916 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_001218358 |
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| Protein GI | 147674221 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0408] Coproporphyrinogen III oxidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00683566 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGAGTCGA TAGTCGATAA ACAAGCAGTG AAGCACTTTT TACTGCAGCT ACAAGATAAG
ATTTGCCAAC AATTGGAAGC CACAGATGGC CAAGCGCAAT TTATTGAAGA TGCGTGGCAG
CGTGAACCGG GTGAGAAACT GGGTGGTGGT GGCCGTACGC GAGTCATGCG TGAGGGCGCT
GTTTTCGAAC AGGGTGGCGT GAACTTTTCC CATGTATTTG GTGAGCAGAT GCCTGCCTCT
GCGACGGCCC ATCGTCCAGA ATTGGCAGGT CGCCGCTTTG AAGCCATGGG CGTTTCTCTG
GTCATGCACC CGAAAAATCC GTATGTTCCG ACCTCTCATG CCAATGTGCG CTTTTTTATT
GCTGAAAAAG AGGGCGAAGC TCCGATCTGG TGGTTTGGTG GTGGTTTTGA CCTTACGCCG
TTTTATCCCT TTGTTGAGGA TGGCCAGCAC TGGCATCAAA CTGCTAAAAA TATCTGCGCC
CCTTTTGGGT CAGAAATCTA TAACGAACAT AAAGCATGGT GTGATCGCTA TTTCTACTTA
CCACACCGCA ATGAAACACG CGGCATCGGC GGATTGTTTT TTGATGATCT CAATGAATGG
TCATTCGAGC AATGTTTCGC TTATATGCAG GCGGTCGGCG AAGGTTATAC CCAAGCTTAT
GTGCCGATTG TCGAAAAACG CAAAAACACG CCCTTTACAG AGCGCGAGCG CCAATTTCAA
CTCTATCGTC GCGGTCGATA CGTTGAATTT AACTTGGTGT TGGATCGCGG CACGCTGTTT
GGCCTTCAAA CCGGTGGGCG TACCGAATCA ATCTTGATGT CGATGCCTCC CTTAGCGCGT
TGGGAATACG CATATCAACC GCAAGCAGGA ACGCCAGAAG CCAAGCTAAG CGAGTTTTTA
GTGCCTCGTG AATGGTGA
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| Protein sequence | MESIVDKQAV KHFLLQLQDK ICQQLEATDG QAQFIEDAWQ REPGEKLGGG GRTRVMREGA
VFEQGGVNFS HVFGEQMPAS ATAHRPELAG RRFEAMGVSL VMHPKNPYVP TSHANVRFFI
AEKEGEAPIW WFGGGFDLTP FYPFVEDGQH WHQTAKNICA PFGSEIYNEH KAWCDRYFYL
PHRNETRGIG GLFFDDLNEW SFEQCFAYMQ AVGEGYTQAY VPIVEKRKNT PFTERERQFQ
LYRRGRYVEF NLVLDRGTLF GLQTGGRTES ILMSMPPLAR WEYAYQPQAG TPEAKLSEFL
VPREW
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