| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2464 |
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| Symbol | aroE |
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| ID | 5137205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2616824 |
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| End bp | 2617660 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533915 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001218357 |
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| Protein GI | 147674570 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000013894 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCTC AAATCGATCA GTATGCCGTT TTTGGTAACC CCATTAATCA CAGTAAATCC
CCTTTTATTC ATACGCTGTT TGCACGACAA ACTCAGCAGT CCATGATCTA TACCGCACAG
TGCGTGCCAG TGGATGGGTT TACTGAGGCG GCGAAACATT TTTTTGCGCA AGGTGGACGA
GGTTGTAATG TTACCGTGCC ATTTAAAGAG GAGGCGTACC GCTTTGCCGA TCGCTTAACG
GAGCGCGCGC GTTTAGCCGG TGCGGTAAAC ACGTTAAAAA AGCTGGATGA TGGCGAAATA
CTCGGAGACA ACACCGATGG TGAAGGCTTA GTGCAAGATC TACTCGCGCA GCAAGTGCTA
CTGAAAGGCG CGACGATTTT GTTGATTGGT GCTGGTGGTG CGGCGCGTGG CGTGCTCAAG
CCGTTATTAG ATCAGCAGCC GGCCTCTATT ACCGTCACGA ATCGTACCTT TGCGAAAGCG
GAGCAGTTGG CTGAGCTTGT GGCCGCTTAT GGTGAGGTAA AGGCGCAAGC GTTCGAACAG
CTTAAACAAA GTTATGATGT GATCATCAAC TCGACCTCTG CCAGTCTCGA TGGCGAATTG
CCTGCGATTG ATCCGGTGAT CTTTTCATCT CGCTCCGTCT GCTATGACAT GATGTATGGC
AAAGGCTATA CCGTGTTTAA TCAATGGGCG CGACAACATG GCTGCGCGCA AGCGATCGAT
GGCTTAGGCA TGTTAGTGGG ACAAGCGGCT GAAAGTTTTA TGCTATGGCG TGGTTTACGT
CCGGGCACGA AACAAATTTT GCGTGAACTG CGTAAAAATC TAGAAGGTGC GCTATGA
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| Protein sequence | MASQIDQYAV FGNPINHSKS PFIHTLFARQ TQQSMIYTAQ CVPVDGFTEA AKHFFAQGGR
GCNVTVPFKE EAYRFADRLT ERARLAGAVN TLKKLDDGEI LGDNTDGEGL VQDLLAQQVL
LKGATILLIG AGGAARGVLK PLLDQQPASI TVTNRTFAKA EQLAELVAAY GEVKAQAFEQ
LKQSYDVIIN STSASLDGEL PAIDPVIFSS RSVCYDMMYG KGYTVFNQWA RQHGCAQAID
GLGMLVGQAA ESFMLWRGLR PGTKQILREL RKNLEGAL
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