Gene VC0395_A2457 details

Gene Information

• Locus tag: VC0395_A2457
• Symbol: rrlE
• ID: 5135070
• Type: rRNA
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 2610658
• End bp: 2613546
• Gene Length: 2889 bp
• GC content: 52%
• IMG OID: 640533909
• Product: 23S ribosomal RNA

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTAAGT GACTAAGCGT ACACGGTGGA TGCCTGGGCA GTCAGAGGCG ATGAAGGACG 
TACTAACTTG CGATAAGCGC AGATAAGGCA GTAAGAGCCG TTTGAGTCTG CGATTTCCGA 
ATGGGGAAAC CCAACTGCAT AAGCAGTTAC TGTTAACTGA ATACATAGGT TAACAGAGCA 
AACCGGGGGA ACTGAAACAT CTAAGTACCC CGAGGAGAAG AAATCAACCG AGATTCCGGT 
AGTAGCGGCG AGCGAACCTG GATTAGCCCT TAAGCACTCG GTGAAGTAGG TGAACAAGCT 
GGAAAGCTTG GCGATACAGG GTGATAGCCC CGTAACCGAC GCTTCATCGA GCGTGAAATC 
GAGTAGGGCG GGACACGTGA TATCCTGTCT GAATATGGGG GGACCATCCT CCAAGGCTAA 
ATACTCCTGA CTGACCGATA GTGAACCAGT ACCGTGAGGG AAAGGCGAAA AGAACCCCTG 
TGAGGGGAGT GAAATAGAAC CTGAAACCGT GTACGTACAA GCAGTAGGAG CACCTTCGTG 
GTGTGACTGC GTACCTTTTG TATAATGGGT CAGCGACTTA TATTCAGTGG CAAGGTTAAC 
CGTATAGGGG AGCCGTAGCG AAAGCGAGTC TTAACTGGGC GCTCAGTCTC TGGATATAGA 
CCCGAAACCG GGTGATCTAG CCATGGGCAG GTTGAAGGTT GAGTAACATC AACTGGAGGA 
CCGAACCGAC TAATGTTGAA AAATTAGCGG ATGACTTGTG GCTAGGGGTG AAAGGCCAAT 
CAAACTCGGA GATAGCTGGT TCTCCCCGAA AGCTATTTAG GTAGCGCCTC GGACGAATAC 
TACTGGGGGT AGAGCACTGT TAAGGCTAGG GGGTCATCCC GACTTACCAA CCCTTTGCAA 
ACTCCGAATA CCAGTAAGTA CTATCCGGGA GACACACGGC GGGTGCTAAC GTCCGTCGTG 
GAGAGGGAAA CAACCCAGAC CGCCAGCTAA GGTCCCAAAG TATTGCTAAG TGGGAAACGA 
TGTGGGAAGG CTCAGACAGC TAGGATGTTG GCTTAGAAGC AGCCATCATT TAAAGAAAGC 
GTAATAGCTC ACTAGTCGAG TCGGCCTGCG CGGAAGATGT AACGGGGCTA AGCAATACAC 
CGAAGCTGCG GCAATGTCTT TTAGACATTG GGTAGGGGAG CGTTCTGTAA GCCGTTGAAG 
GTGAATCGTA AGGTTTGCTG GAGGTATCAG AAGTGCGAAT GCTGACATGA GTAACGACAA 
AGGGGGTGAA AAACCTCCTC GCCGGAAGAC CAAGGGTTCC TGTCCAACGT TAATCGGGGC 
AGGGTGAGTC GACCCCTAAG GTGAGGCCGA AAGGCGTAAT CGATGGGAAA CGGGTTAATA 
TTCCCGTACT TCTGACTATT GCGATGGGGG GACGGAGAAG GCTAGGTGGG CCAGGCGACG 
GTTGTCCTGG TTCAAGTGCG TAGGCTTGAG AGTTAGGTAA ATCCGGCTCT CTCTAAGGCT 
GAGACACGAC GTCGAGCTGC TACGGCAGTG AAGTCATTGA TGCCATGCTT CCAGGAAAAG 
CCTCTAAGCT TCAGATAGTC AGGAATCGTA CCCCAAACCG ACACAGGTGG TCGGGTAGAG 
AATACCAAGG CGCTTGAGAG AACTCGGGTG AAGGAACTAG GCAAAATGGT ACCGTAACTT 
CGGGAGAAGG TACGCTCTTG ATGGTGAAGT CCCTCGCGGA TGGAGCTGAC GAGAGTCGCA 
GATACCAGGT GGCTGCAACT GTTTATTAAA AACACAGCAC TGTGCAAAAT CGCAAGATGA 
CGTATACGGT GTGACGCCTG CCCGGTGCCG GAAGGTTAAT TGATGGGGTT AGCGCAAGCG 
AAGCTCTTGA TCGAAGCCCC GGTAAACGGC GGCCGTAACT ATAACGGTCC TAAGGTAGCG 
AAATTCCTTG TCGGGTAAGT TCCGACCTGC ACGAATGGCG TAATGATGGC CACGCTGTCT 
CCACCCGAGA CTCAGTGAAA TTGAAATCGC TGTGAAGATG CAGTGTACCC GCGGCTAGAC 
GGAAAGACCC CGTGAACCTT TACTACAGCT TGGCACTGAA CATTGAACCT ACATGTGTAG 
GATAGGTGGG AGGCTATGAA GACGTGACGC CAGTTGCGTT GGAGCCGTCC TTGAAATACC 
ACCCTTGTAT GTTTGATGTT CTAACTTAGA CCCGTTATCC GGGTTGAGGA CAGTGCCTGG 
TGGGTAGTTT GACTGGGGCG GTCTCCTCCC AAAGAGTAAC GGAGGAGCAC GAAGGTGGGC 
TAATCACGGT TGGACATCGT GAGGTTAGTG CAATGGCATA AGCCCGCTTA ACTGCGAGAA 
TGACGGTTCG AGCAGGTGCG AAAGCAGGTC ATAGTGATCC GGTGGTTCTG TATGGAAGGG 
CCATCGCTCA ACGGATAAAA GGTACTCCGG GGATAACAGG CTGATACCGC CCAAGAGTTC 
ATATCGACGG CGGTGTTTGG CACCTCGATG TCGGCTCATC ACATCCTGGG GCTGAAGTCG 
GTCCCAAGGG TATGGCTGTT CGCCATTTAA AGTGGTACGC GAGCTGGGTT TAGAACGTCG 
TGAGACAGTT CGGTCCCTAT CTGCCGTGGG CGTTGGAAGA TTGAAGGGGG CTGCTCCTAG 
TACGAGAGGA CCGGAGTGGA CGAACCTCTG GTGTTCGGGT TGTGTCGCCA GACGCATTGC 
CCGGTAGCTA AGTTCGGAAT TGATAAGCGC TGAAAGCATC TAAGCGCGAA GCGAGCCCTG 
AGATGAGTCT TCCCTGACAG TTTAACTGTC CTAAAGGGTT GTTCGAGACT AGAACGTTGA 
TAGGCAGGGT GTGTAAGCGT TGTGAGGCGT TGAGCTAACC TGTACTAATT GCCCGTGAGG 
CTTAACCAT 

 

Protein sequence