| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2450 |
|---|
| Symbol | thiF |
|---|
| ID | 5135957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 2605264 |
|---|
| End bp | 2606040 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640533902 |
|---|
| Product | adenylyltransferase ThiF |
|---|
| Protein accession | YP_001218350 |
|---|
| Protein GI | 147674373 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
|---|
| TIGRFAM ID | [TIGR02356] thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACAG ATAAACAGTT TCTTCGCTAT CAAAGGCAGA TCAGCCTTGC TGAGCTTGGA
GAGGAAGGGC AGCAAAAACT GCTTAATTCA CGTGTGTTGA TAGTTGGCTG CGGGGGGCTT
GGTAATGTGG TGGCCCCTTA CTTGGTTGGT GCAGGTGTTG GACAAGTGAT TATCGCGGAT
AGTGATAGGC TGGAGTTACA CAACTTACAC CGTCAGATTT GCTATCACGA GGCACAAATT
GGTCACAATA AAGCCGAGCT TCTTGCTCGG CACTTGCGTG AACTCAATTC AGAAGTACGA
GTGCGGGTGA TTGCTCGGGA AGTAGATGAG CTGATCCTGA ACTTAGAAAT CAACCAAGTG
GATTTGGTGT TGGATTGTAG TGATAACCTT CCAACCCGCC ACGCAATTAA TCGAGCCTGT
TATGCAGCGC AGCGGCCACT CATCAGCGGT GCCGTCATTG GGTGGGAAGG GCATCTCATG
GCGTTTGACT ATCGCCAATC TACACCTTGC TATCAGTGTG TCGTACCGGA TATGGCAGAG
CGCCAACGCT GCAGTGACCG AGGCGTTATT GGCCCTGTTG TCGGTATGAT TGGTAACGGA
CAAGCCTTAA TCGCACTGCA TGCTCTGATG GGGAGCGCCC ATTTTCCTGC TAACCAATTA
CTGCGCTTTG ACGGTAAATC TATGAACTGG CAGAGCTTAC AGCTTCATCC AGATAAGGTT
TGCCCAGTTT GCAGCGTATC GTCACCTGCA CAACCGAAGG AGCCGCAACC GTGCTAA
|
|---|
| Protein sequence | MLTDKQFLRY QRQISLAELG EEGQQKLLNS RVLIVGCGGL GNVVAPYLVG AGVGQVIIAD
SDRLELHNLH RQICYHEAQI GHNKAELLAR HLRELNSEVR VRVIAREVDE LILNLEINQV
DLVLDCSDNL PTRHAINRAC YAAQRPLISG AVIGWEGHLM AFDYRQSTPC YQCVVPDMAE
RQRCSDRGVI GPVVGMIGNG QALIALHALM GSAHFPANQL LRFDGKSMNW QSLQLHPDKV
CPVCSVSSPA QPKEPQPC
|
|---|
| |