| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2438 |
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| Symbol | uspA |
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| ID | 5136773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2592643 |
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| End bp | 2593068 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640533890 |
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| Product | universal stress protein A |
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| Protein accession | YP_001218338 |
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| Protein GI | 147674332 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTTATC AACATCTTTT GGTTGCGGTC GACCTGTCTG AAGACAGCAA ACTGCTGGTT
GAAAAAGCGG TGGCTCTGGC CAAACCTCTC AATGCGGAAG TCTCATTTAT TCATATCGAC
GTGAACTACG CCGAGCTGTA CACGGGCCTT ATCGACATTA ATTTGGCCGA AACGCAACAT
CACGCGATGG AAGCTTCACA AAAGCAACTG CAGGATTTGG CGCAGCATGC CAATTACCCC
ATCAAGCATA CCTTGGTCGG TAGCGGCGAT TTAACCAATG AGCTGTGCGA AACCATCAGC
GAGTTTAACG TGGATTTACT GGTGTGTGGC CATCACCAAG ATTTCTGGAG CAAACTGCTC
TCTTCCACAC GGCAACTGAT CAACAGCTCG CCAGTGGATA TGTTAGTCAT TCCACTCAAC
GACTGA
|
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| Protein sequence | MSYQHLLVAV DLSEDSKLLV EKAVALAKPL NAEVSFIHID VNYAELYTGL IDINLAETQH
HAMEASQKQL QDLAQHANYP IKHTLVGSGD LTNELCETIS EFNVDLLVCG HHQDFWSKLL
SSTRQLINSS PVDMLVIPLN D
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