Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2427 |
Symbol | |
ID | 5135948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2583016 |
End bp | 2583768 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640533879 |
Product | hypothetical protein |
Protein accession | YP_001218327 |
Protein GI | 147675120 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
Num covering plasmid clones | 63 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTCCG TTGAACAGAC CCAACCTTTG ATCAGCCATT TGTTGGAACT GCGTAATCGC CTACTCAAAG CGGTGGCGGC TGTGGTGGTG ATATTTATTG GCTTGATCTA TTTCTCGAAT GAAATTTACG AGTTTGTCTC AAAACCCCTA GTCGAGCGAC TTCCCGCGGG CGCAACCATG ATTGCGACCG ATGTGGCTTC ACCCTTTTTC ACGCCTTTAA AACTGACGTT GATTGCCGCG GTGTTTCTCG CGGTGCCTTT CATTTTGTAT CAGGTGTGGG CTTTTGTGGC TCCCGGTTTA TATAAGCACG AACGGCGTTT AATCTTCCCA CTGCTGGTCT CTAGCTCGCT GCTGTTTTAC TGCGGTGTCG CGTTTGCCTA TTTTGTGGTG TTTCCGCTGG TGTTTGGATT TTTCACCGCC ATTTCACTCG GTGGTGTGGA GTTCGCGACC GATATCGCGA GTTATCTCGA TTTTGTATTG GCGCTGTTTC TAGCCTTTGG TATCGCGTTT GAAGTGCCAG TTGCGATCAT TCTGCTGTGC TGGACGGGCG CAACCACGCC TAAAAGCCTA TCGGAAAAGC GTCCATACAT TATCGTTGGT GCGTTTGTAG TTGGTATGTT ACTGACGCCG CCGGATATGA TTTCGCAAAC GCTACTCGCC ATACCTATGT GCTTGTTGTT TGAAGTTGGT TTGTTCTTCG CTCGTTTTTA TACCCGTGAT GAAGCCGATG AAGGACAAGA GGAAGAAGAA TAA
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Protein sequence | MSSVEQTQPL ISHLLELRNR LLKAVAAVVV IFIGLIYFSN EIYEFVSKPL VERLPAGATM IATDVASPFF TPLKLTLIAA VFLAVPFILY QVWAFVAPGL YKHERRLIFP LLVSSSLLFY CGVAFAYFVV FPLVFGFFTA ISLGGVEFAT DIASYLDFVL ALFLAFGIAF EVPVAIILLC WTGATTPKSL SEKRPYIIVG AFVVGMLLTP PDMISQTLLA IPMCLLFEVG LFFARFYTRD EADEGQEEEE
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