Gene VC0395_A2377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2377 
Symbol 
ID5137150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp2533438 
End bp2534067 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content48% 
IMG OID640533829 
Producthypothetical protein 
Protein accessionYP_001218277 
Protein GI147675359 
COG category[S] Function unknown 
COG ID[COG3714] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.549446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATGT TGAGCTGGAT TTCTGTCGTG TTGTCGGGGT TTATCAGCAT TTCTACTTAT 
GAAAATCAGA AGCTTAAGCA AGCGATATTC TTTCGAATCT TCAGCCTCCT GTTACTGACA 
ATTATTGTGT GGGAGCAGCA CAGTCATGCC ACGCCAGAGG TGATTTTTAT CTCTCTTGGT 
TTGGCGGTGT CGATGTTTGC GCATGGACTG CGGCTAAATC ATCGCTACCA CAAAGCCAGC 
TTTGTGCTGT TTTTAGTCGC GCAACTGCTG TTTAGTAAAG CATTCTGGGT GCAATTGTCG 
GGGAGTATGG TGTGGTGGTT GCCCGCATTA CTGGTGGCGG CAAGCATAGT GGCGTTTTTT 
TTGTTACTGC CACAAATTGA TACCTTAATC TTCCCGGTCA CCATTATGGG GTTGATGTTA 
GTACAGATGA CGTGGGCTGC GGGTGAACTG TGGCTACAAG AGGCCACCGT GGCTTCTGGC 
GCTGGTTTCT TAGGATGTCT GGTTTATATC CTCTCGGCCA CGTTATTAGC CATCCACGAT 
TATCGGCGTC CACTTCCTTG GGGGCACACT CTTATCTCCA GCTCCTACTT GATAGCCCAA 
GCCTTGATCT CAGCGTCGAT CGTGTTTTAG
 
Protein sequence
MSMLSWISVV LSGFISISTY ENQKLKQAIF FRIFSLLLLT IIVWEQHSHA TPEVIFISLG 
LAVSMFAHGL RLNHRYHKAS FVLFLVAQLL FSKAFWVQLS GSMVWWLPAL LVAASIVAFF 
LLLPQIDTLI FPVTIMGLML VQMTWAAGEL WLQEATVASG AGFLGCLVYI LSATLLAIHD 
YRRPLPWGHT LISSSYLIAQ ALISASIVF