| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2365 |
|---|
| Symbol | |
|---|
| ID | 5137851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 2520094 |
|---|
| End bp | 2522553 |
|---|
| Gene Length | 2460 bp |
|---|
| Protein Length | 819 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640533817 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001218265 |
|---|
| Protein GI | 147675616 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA GTCGCTTATC TGTTTCCAGA AATCAACATA AACCAATCAC ACAACTAAAG
ACTAAGGATA ATGTCACTTC ATTAGACTTG AGCTTTGAAT TGCATCAACG AGGGATGGCA
TACAGTATCA AATATAACCT TCTTGATTGG TGCCATGAGC AGTGTGACCC TCAAAAACCA
TTAGTACAAC CGTCTCGATT GAATAGGATG CAAAAGCTAA GGGCGTGGGT TAATCAAGAG
AGAAAAAATC AAAGTAGTGA AGCCTATATA AGAGTTAAAT TAGCGAGTTT AAAGCAGTAT
ATTTCTTTTT GTGACTTTAA TATGCTCGAC CCTTTTTCTC AGGGGGGATA CCTTTCTTAC
GTTGGTAACT CAGGTCAATT GTGGCGTTTA GTTAACGCGG CTAATGAGCC CAAAAGATAT
CACTTTCAGT ATCATGACGG TGAAGAGGCT GGCTTGTTGG AGGACACTGC TTTTATCCAA
AAGACCTTAC TCGATACACT ACTTACAGTG CTTGATTTTG ATGTGTCAGA GTGGCAAGCC
ACGCTTAAAC CCTTCTCAAT AAAGAATAGT GAATCATCAA CACAGCCGTA TACATCAAGT
GAATGGTATG CATTAGTTAA ACGAACTCAA CTATTCTTTT TCTCTCTAGC AACTCAACTT
ATTGCGTTTA AAGAGGAAAA CCCCGAAGCC CCTCCGCCTC AATGCTTAGA AGGCATTGTA
GTTGATAGAA ATAATGGTCG GGACATCACA ATTACACTGA GGGGCAAGGA CGGCTCTGTG
AGTCCGTTTA ATCAATGCAT GGCGGCAGCT TACACCCTAT TTGCCTACTA CACTGCATTT
AACGACACAG TAATAAAAGA TGTTCGCCAT CCCATTAAAG TGATTACATC GAAGGTAGAA
GGTCGCACAT CGAAAACTGC TCAAGTTCGT GCTTACAAAA GTCGCGCTTC AAAAGACGTA
AAAGCGTTGT TTGCAGGTTC AGATGAAAAC TTGCATCCCG AAGCTATTGA AAAAGAGGCA
GGGTTTATTG TTGCCGAAAT CAATAAGCGC GACGCTGTTG GAAAAATAGA CGGAATCACT
TTTATTCAAA CTCTCGAACT CCTCTCTAAA TCCTATAGCA ATGATCCTTT TGATACATTG
ATATATTTTC TTGATAAAGA AGGAGAAAAA GACAAGGTCA ATGTGAGTCA TGCTTTATTG
AAACTATCGC AGAACTTAAA TTTGCTTTCT AGCCGAAGAG GTGAATTAAC CGAGCATTTG
ATAAAAACCT ACACCGACAT TGTTGAGAAT CAAAATATGC CCATCTTCAA TTGGACCCAG
AGAGAAGATG GCGCAAGGAC AATGAATAAA CAGGTCATCT ATCTTAATAA AAGAACTGCA
ACAAAAAGAT CAACCCCTAT AGCTTACGCA GCTTTATCAT GTATGACGGA TGTTTCACTT
CGAAACGCAC TGATACCACT GCACTATGCT GAGAAAGATG CTAATGGAGA GATCACTGTT
TCCTTTAAAT ATGTCGATGG CTCGGAAGGC GAATTTACTG TTACAGCCAA ACACCTACCT
TTTCTTCAAT TAGTTGAATG TCATGCAGCA ACTAGAAACC CGTTACCAAA GGAACGTAGT
CTTGGTGGTA TAGGTAGACA CTCTAATGCA ACCAAACCTC CTTTCTTACT GCCTTTAGGT
ACAAAGTCAA TGACTTATCA GTGGCAGGAA GGTGAGGTTC CTATTAGCGC GAGCATGTTA
AGTTATTGCG GTATTGGTTA TGGTGATTAC TTTCTAAACA TTAACTCTCG ACGAATTCGT
GTTACTCACT CTGATTTAGA ATACAAACCA GAAGAGCGTG GAATGACCGC CCAAAAGATT
TTGCAGCACA GCATTGACAC GGCTGATAAA AAATACCGTA ACGGGCACCC TGTGCAAAAC
AATAAGCAAG TCTCGCAAGG ACTAATGGCG CTATCTCGCA TAGCAGAAGG CGAGACACGC
AATGAAGCCA TAGAATCGGT CAAGGCAGAG CTAAAAATTC CCGTATTAGA GTACGAGGTT
TGGAAAAAAC GCAATCAACC AACGAACCCA AACGGCATTA GTTGTGACGG TAAAATTGAT
TTGAATTCAG AGAAAGATTG GCATTATGCA GCGCGTAAAT TTGCAGAGGA AATGGGAATT
ATTAAAGAGG GGGACGACAT CACCTGCTAT CAATACGATC TTTGCCCTTT TTGTAAAAGC
GCCAAACTCG TTGATGACCC TTACGCAATT TATAAATTAC TGAGCTTTCT CGATGTGTTT
AGTGAGGCTA TTGATCGATA CCCAGAACGC GCTTCGGTTA TCCAGTCAAA GATAGAACGC
TTTCAAGAAC ATCTTGATGA CCTTCCTTTT GAAACTATCG AGAAAGCTGA AGATTTACTT
GAAGAAAAAG GACGTTATCC GCTTTTTCAC TCGTTATCTT CCGTTACTCA GTTTCTATAA
|
|---|
| Protein sequence | MAKSRLSVSR NQHKPITQLK TKDNVTSLDL SFELHQRGMA YSIKYNLLDW CHEQCDPQKP
LVQPSRLNRM QKLRAWVNQE RKNQSSEAYI RVKLASLKQY ISFCDFNMLD PFSQGGYLSY
VGNSGQLWRL VNAANEPKRY HFQYHDGEEA GLLEDTAFIQ KTLLDTLLTV LDFDVSEWQA
TLKPFSIKNS ESSTQPYTSS EWYALVKRTQ LFFFSLATQL IAFKEENPEA PPPQCLEGIV
VDRNNGRDIT ITLRGKDGSV SPFNQCMAAA YTLFAYYTAF NDTVIKDVRH PIKVITSKVE
GRTSKTAQVR AYKSRASKDV KALFAGSDEN LHPEAIEKEA GFIVAEINKR DAVGKIDGIT
FIQTLELLSK SYSNDPFDTL IYFLDKEGEK DKVNVSHALL KLSQNLNLLS SRRGELTEHL
IKTYTDIVEN QNMPIFNWTQ REDGARTMNK QVIYLNKRTA TKRSTPIAYA ALSCMTDVSL
RNALIPLHYA EKDANGEITV SFKYVDGSEG EFTVTAKHLP FLQLVECHAA TRNPLPKERS
LGGIGRHSNA TKPPFLLPLG TKSMTYQWQE GEVPISASML SYCGIGYGDY FLNINSRRIR
VTHSDLEYKP EERGMTAQKI LQHSIDTADK KYRNGHPVQN NKQVSQGLMA LSRIAEGETR
NEAIESVKAE LKIPVLEYEV WKKRNQPTNP NGISCDGKID LNSEKDWHYA ARKFAEEMGI
IKEGDDITCY QYDLCPFCKS AKLVDDPYAI YKLLSFLDVF SEAIDRYPER ASVIQSKIER
FQEHLDDLPF ETIEKAEDLL EEKGRYPLFH SLSSVTQFL
|
|---|
| |