Gene VC0395_A2362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2362 
Symbol 
ID5136338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2516604 
End bp2517170 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content44% 
IMG OID640533814 
ProductDNA-invertase 
Protein accessionYP_001218262 
Protein GI147675219 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones71 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG GCTATGCCCG TGTCTCAACA AATGATCAAG AGCTTCACCT ACAACTCGAC 
GCTCTAAATG AAATGGGGTG TGACAAGATA TACACTGAAA AAGCGTCTGG AAAAACTTTT
AACCGCCCTG AGCTTGAAAA AGCACTCGAC AACCTACGTG AAGGAGATGT CTTCGTTGTA
TGGCGCTTAG ATCGACTGGG ACGAAGCCTG CCTCACCTTA TCGAAACAGT TAACGGGTTA
AAAGAGCGAA ACATTGGGTT TGTATCAATT GCGGAAGCAA TTGATACTTC AAGCCCTGCG
GGAGAACTGA TCTTTCACAT TTTCGGTGCT ATCGCGCAAT TTGAACGTTC TCTGATTAGC
GAAAGAACCA AGGCAGGCTT AGCCGCAGCC AAAAGGCGCG GGAAAAATGT AGGTAGAAAG
CCAAGTATGT CTAGGAAAGA CATGAGATTA GCTGCTGGTA TGCTACTTAG CGGTTCAATC
ACCAAAACTG AAGTAGCAAA ACATTTTGGT GTATCAAGAC CGACCTTAGA TAAGGCACTG
AAAAACATAT CTTTGGAGGA AGAGTAA
 
Protein sequence
MKIGYARVST NDQELHLQLD ALNEMGCDKI YTEKASGKTF NRPELEKALD NLREGDVFVV 
WRLDRLGRSL PHLIETVNGL KERNIGFVSI AEAIDTSSPA GELIFHIFGA IAQFERSLIS
ERTKAGLAAA KRRGKNVGRK PSMSRKDMRL AAGMLLSGSI TKTEVAKHFG VSRPTLDKAL
KNISLEEE