| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2353 |
|---|
| Symbol | |
|---|
| ID | 5136294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 2505023 |
|---|
| End bp | 2505385 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640533805 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001218253 |
|---|
| Protein GI | 147674920 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4190] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 67 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAA AAATCGGCAT TCTATCAGAA GAGCTTGCTC GTAAGCGCAT GATTCGCATT
GCAGAAGGAA AAGTGACGCC TGAAGAACCT TACCCAAAAT TTTTGTTTGA GTCACTGGCT
GCGCTTTCAC AACTCTTGTC TAACGAAAAT GTTGAACTGT TGAATTTGAT TGCTCGCGAG
AAGCCAAACA ATCTTGATGA ACTTGCTGAA ATGAGTGGGC GTAGTATCAA GGATGTTACT
GATGCTTTCG AAGCTCTTTC ATCTAAGGGC TTTGCTTATC TGGATGTGAG GGGAATGGAA
TCTCGACCAA TAGCGTTGTT TACGAAGTTC GAGATCGTAA TGGGCAGTTC TCCTTTACTT
TGA
|
|---|
| Protein sequence | MKAKIGILSE ELARKRMIRI AEGKVTPEEP YPKFLFESLA ALSQLLSNEN VELLNLIARE
KPNNLDELAE MSGRSIKDVT DAFEALSSKG FAYLDVRGME SRPIALFTKF EIVMGSSPLL
|
|---|
| |