| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2341 |
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| Symbol | |
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| ID | 5135501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2494801 |
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| End bp | 2496408 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640533793 |
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| Product | alkaline serine protease |
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| Protein accession | YP_001218241 |
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| Protein GI | 147674600 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1404] Subtilisin-like serine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00532226 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAA AGTTTTTAAG CTTATGCATT GTTTCGACGT TTTCCGTCGC AGCAACCTCA
GCACTTGCCC AACCCAATCA GCTTGTTGGC AAATCATCTC CTCAACAATT AGCACCATTG
ATGAAAGCCG CTTCAGGGAA AGGCATTAAA AATCAATACA TTGTTGTACT CAAGCAACCA
ACGACAATCA TGAGTAATGA TTTGCAAGCT TTCCAACAAT TTACTCAACG ATCTGTCAAT
GCATTAGCCA ATAAGCATGC ACTCGAAATC AAAAATGTTT TTGATAGTGC GTTAAGCGGT
TTTTCTGCAG AGCTAACGGC TGAGCAACTA CAAGCTCTTC GTGCCGATCC TAACGTCGAC
TATATCGAGC AAAACCAAAT TATTACGGTT AATCCGATCA TCTCTGCATC AGCAAATGCG
GCTCAAGATA ACGTAACCTG GGGAATCGAC CGCATCGATC AGCGCGATCT ACCGCTCAAT
CGTAGTTATA ACTACAACTA TGATGGCAGT GGCGTTACCG CTTATGTGAT CGATACCGGT
ATTGCTTTCA ACCATCCTGA ATTTGGTGGA CGAGCAAAAT CCGGCTATGA CTTTATCGAT
AACGATAATG ATGCCAGTGA CTGCCAAGGC CACGGTACAC ATGTGGCAGG CACTATCGGG
GGCGCTCAAT ACGGTGTAGC TAAAAACGTT AACTTAGTTG GTGTGCGAGT GCTGGGATGT
GATGGTAGTG GTTCAACTGA AGCGATCGCC CGTGGTATTG ACTGGGTGGC TCAAAACGCG
TCCGGCCCTT CTGTTGCCAA TTTGAGTTTA GGGGGAGGGA TATCTCAGGC GATGGATCAA
GCAGTGGCTC GACTCGTCCA AAGAGGAGTC ACGGCGGTCA TTGCTGCTGG TAACGATAAT
AAAGATGCTT GCCAAGTATC CCCTGCACGT GAACCAAGTG GTATCACTGT AGGTTCAACG
ACCAATAATG ATGGTCGCTC TAACTTCTCG AACTGGGGTA ATTGTGTACA GATCTTCGCA
CCAGGATCTG ACGTCACTTC GGCGTCGCAT AAAGGTGGCA CGACGACTAT GAGTGGTACG
TCTATGGCCT CACCCCATGT AGCTGGTGTC GCAGCCTTGT ACTTACAAGA GAATAAGAAC
CTCTCTCCGA ATCAAATCAA AACGCTGCTT AGCGACCGAT CAACCAAAGG CAAAGTCAGC
GACACTCAAG GAACACCAAA TAAGCTGCTG TATAGTTTGA CCGATAACAA TACCACTCCG
AATCCTGAGC CAAATCCGCA ACCAGAGCCA CAACCGCAGC CTGACAGCCA ATTGACTAAT
GGTAAAGTGG TTACAGGCAT CAGTGGCAAG CAAGGTGAAT TGAAAAAATT CTATATTGAT
GTGCCTGCAG GTCGTCGCTT GAGTATCGAG ACCAACGGAG GTACGGGTAA TCTTGATCTC
TATGTTCGTC TAGGTATTGA GCCAGAACCG TTTGCTTGGG ATTGCGCATC TTATCGCAAC
GGCAATAATG AAGTTTGTAC CTTCCCGAAT ACCCGAGAAG GTCGCCACTT CATTACACTC
TATGGCACCA CTGAGTTTAA CAATGTCAGT TTGGTGGCTC GCTACTAA
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| Protein sequence | MFKKFLSLCI VSTFSVAATS ALAQPNQLVG KSSPQQLAPL MKAASGKGIK NQYIVVLKQP
TTIMSNDLQA FQQFTQRSVN ALANKHALEI KNVFDSALSG FSAELTAEQL QALRADPNVD
YIEQNQIITV NPIISASANA AQDNVTWGID RIDQRDLPLN RSYNYNYDGS GVTAYVIDTG
IAFNHPEFGG RAKSGYDFID NDNDASDCQG HGTHVAGTIG GAQYGVAKNV NLVGVRVLGC
DGSGSTEAIA RGIDWVAQNA SGPSVANLSL GGGISQAMDQ AVARLVQRGV TAVIAAGNDN
KDACQVSPAR EPSGITVGST TNNDGRSNFS NWGNCVQIFA PGSDVTSASH KGGTTTMSGT
SMASPHVAGV AALYLQENKN LSPNQIKTLL SDRSTKGKVS DTQGTPNKLL YSLTDNNTTP
NPEPNPQPEP QPQPDSQLTN GKVVTGISGK QGELKKFYID VPAGRRLSIE TNGGTGNLDL
YVRLGIEPEP FAWDCASYRN GNNEVCTFPN TREGRHFITL YGTTEFNNVS LVARY
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