| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2339 |
|---|
| Symbol | murI |
|---|
| ID | 5136880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 2493611 |
|---|
| End bp | 2494408 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640533792 |
|---|
| Product | glutamate racemase |
|---|
| Protein accession | YP_001218240 |
|---|
| Protein GI | 147673599 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0796] Glutamate racemase |
|---|
| TIGRFAM ID | [TIGR00067] glutamate racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00000177868 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCATCTC CATCTTTTCC TCGTGTTCTG ATTTTCGATT CTGGTGTGGG TGGTCTTTCC
GTATATCGAG AAATTGAAGC CCGCTTGCCG CAATTAAACT ATATCTATCT GTTTGATAAC
GCGGCATATC CTTATGGTGA GCTGACCCAG GAAACACTGA TCGCACGAGT TGATACGCTG
GTTACTCGAA TGGTTGAACA AGAGCGAATC GATCTTGTGG TCATCGCTTG TAATACCGCG
AGCACCATAG TGTTACCCGT ATTGCGCGCC AAACTCACGA TACCTGTGGT CGGGGTTGTG
CCTGCAATTA AACCCGCCTC CCTGATTGCT AGCAAGGCGA TTGGGCTTAT CGCGACGCCA
GCCACAGTGA AACGGCAATA CACTCAAGAA CTGATCCGTG ACTTTTCCGC CAACAAAAAC
GTTGAGCTAT TGGGGTCTAC ACGCTTGGTT AATATGGCTG AAGAGAAATT GCGTGGTAAG
CCTCTCGATC TCGAAGAATT AGCCAGCATA TTGCAACCCC TGAAGAACAC GATTGATGTC
GCCGTTTTAG GCTGTACTCA CTTTCCCCTG ATTAAAGAAG AGATCCAGCA AGTACTTGGA
GAGCAAGTGC AACTGATTGA TTCTGGTTTG GCCATTGCGC GCAGAGTGCA GGAGTTGCTG
GGAATAGAGC AAGCGGTTGG TGCAAAGCAA AAGCATCGAA TTTATGCAAG CGCACCACCA
TGGGAGGAAA GTGCGCTGAA CATAAAGCTT GAACAGTTAG GTTTTAATCC TGTTCAGCCA
TTTCTTCATC CGATTTAG
|
|---|
| Protein sequence | MSSPSFPRVL IFDSGVGGLS VYREIEARLP QLNYIYLFDN AAYPYGELTQ ETLIARVDTL
VTRMVEQERI DLVVIACNTA STIVLPVLRA KLTIPVVGVV PAIKPASLIA SKAIGLIATP
ATVKRQYTQE LIRDFSANKN VELLGSTRLV NMAEEKLRGK PLDLEELASI LQPLKNTIDV
AVLGCTHFPL IKEEIQQVLG EQVQLIDSGL AIARRVQELL GIEQAVGAKQ KHRIYASAPP
WEESALNIKL EQLGFNPVQP FLHPI
|
|---|
| |