Gene VC0395_A2313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2313 
Symbol 
ID5136896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2468624 
End bp2469058 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content51% 
IMG OID640533768 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_001218228 
Protein GI147673087 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAGCAC TGATCCAACG AGTAAGTGAA GCCGCAGTAC GGGTTGATGG TGAAGTGGTC 
GGCGCAATTG ATAAGGGACT TTTAGTGCTA CTCGGTGTCG AACGTGAAGA TGATGAAGCG
AAAGCCAAGC GATTGGTTGA GCGAGTGACC AGCTATCGAG TGTTTGAAGA TAGCGAAGGT
AAGATGAATC TGAGCGTGAA AGATGTGGGT GGCAGTGTGT TAGTGGTGTC GCAATTTACG
CTGCCAGCTG ACACCAAAAA AGGGACTCGT GCTGGATTTT CGCGCGGCGC TGCCCCACAA
GAGGCTGAGC GGTTATATGA TTATTTCTCT GACCTGTGTG CCCAGATTTT GCCAACCGAG
CGCGGCCGTT TTGCGGCGGA TATGAAAGTG TCACTGATCA ATGATGGGCC GGTGACGTTT
TGGCTACAGG CTTAA
 
Protein sequence
MIALIQRVSE AAVRVDGEVV GAIDKGLLVL LGVEREDDEA KAKRLVERVT SYRVFEDSEG 
KMNLSVKDVG GSVLVVSQFT LPADTKKGTR AGFSRGAAPQ EAERLYDYFS DLCAQILPTE
RGRFAADMKV SLINDGPVTF WLQA