Gene VC0395_A2309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2309 
SymbolhslO 
ID5137776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2462655 
End bp2463545 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content50% 
IMG OID640533764 
ProductHsp33-like chaperonin 
Protein accessionYP_001218224 
Protein GI147673226 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1281] Disulfide bond chaperones of the HSP33 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACAC AATCAATGGC GAACAACATG CTACATCGCT ATCTATTTAA AGACCTTTCT 
GTACGTGGTG AGTTGGTTCA ACTGGACGAC ACTTACCAAC AGATGATTTC CAGTCAGGAA
TACCCTGCCG CCGTACAACA CCTCATCGGT GAACTACTGG TCGCCACCTC ACTGCTGACA
GCGACGCTGA AGTTTGAAGG CTCAATCACC CTGCAACTGC AAGGTAATGG ACCGGTCTCT
CTCGTGGTCA TCAACGGCGA TAACAACCAA CAAGTGCGTG GCGTGGCTCG CTGGAAAGGT
GATATTGCGG ATGATGCAAG CCTACATGAC ATGCTTGGCA AAGGTCATCT GGTCATCACC
ATTGAACCTA AGCAAGGCGA GCGCTATCAA GGTGTGGTCG GTTTGGAAGG CGACACCTTA
GCACAAGTGT TGGAAGGTTA TTTTGAACGT TCGGAGCAGC TTAAGACCCG TTTATGGATA
CGTGTTGGCA AACACGATGG GAAAGCTTGT GCCGCAGGCA TGTTGCTGCA AATCGTACCC
GATGGTAAAG GTTCAGCTGA AGATTTCGAG CATCTAGAAC AATTAACTAA CACCATCAAG
GATGAAGAGC TTTTTGCGCT GCCAGCAGAA GAGTTGCTGT ATCGTCTTTA CAACCAAGAG
ACGGTGCAAC TGTTCACACC ACAACAGATC AGCTTCCGTT GTGGCTGCTC ACGTGAACGC
AGTGCTGCCG CGATTGTGAC CGTCGCACGT GAAGAGATTA ACGATATTCT TGCTCAAGAT
GGTGCCGTCG CTCTGCATTG TGATTATTGC GGTACGACCT ACTCGTTTGA CTCTGCGCAA
GTCGCTGAAT TGTATGCCCC CTCATCGGCG AACGGTTCAA CCTTGCATTA A
 
Protein sequence
MTTQSMANNM LHRYLFKDLS VRGELVQLDD TYQQMISSQE YPAAVQHLIG ELLVATSLLT 
ATLKFEGSIT LQLQGNGPVS LVVINGDNNQ QVRGVARWKG DIADDASLHD MLGKGHLVIT
IEPKQGERYQ GVVGLEGDTL AQVLEGYFER SEQLKTRLWI RVGKHDGKAC AAGMLLQIVP
DGKGSAEDFE HLEQLTNTIK DEELFALPAE ELLYRLYNQE TVQLFTPQQI SFRCGCSRER
SAAAIVTVAR EEINDILAQD GAVALHCDYC GTTYSFDSAQ VAELYAPSSA NGSTLH