| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2307 |
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| Symbol | epsC |
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| ID | 5136930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2461112 |
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| End bp | 2462029 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533762 |
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| Product | general secretion pathway protein C |
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| Protein accession | YP_001218222 |
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| Protein GI | 147675412 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3031] Type II secretory pathway, component PulC |
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| TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTA AACAACTTCC TCCGTTGGCA GCGTGGCCGC GTTTATTGAG CCAGAATACG
CTGCGGTGGC AAAAGCCGAT CAGCGAAGGA TTAACGCTAC TGTTATTAGT TGCTTCGGCG
TGGACGCTGG GCAAGATGGT GTGGGTCGTC TCGGCTGAAC AAACACCAGT GCCGACTTGG
AGCCCCACGT TATCAGGGCT TAAGGCCGAA CGTCAGCCAC TCGATATCAG CGTATTGCAA
AAAGGTGAGC TGTTTGGTGT GTTTACTGAG CCGAAAGAAG CTCCGGTTGT GGAGCAACCT
GTGGTGGTGG ATGCTCCGAA AACGCGCTTG AGCCTTGTGC TGTCTGGTGT GGTGGCGAGT
AATGATGCGC AAAAAAGTTT GGCTGTTATC GCCAATCGTG GTGTGCAAGC GACGTATGGC
ATTAATGAAG TGATTGAAGG GACTCAGGCC AAGCTAAAAG CCGTGATGCC GGATCGGGTC
ATCATCAGCA ACTCCGGGCG TGATGAAACC TTGATGCTTG AAGGGTTAGA CTACACCGCG
CCTGCGACGG CTTCGGTATC CAACCCTCCG CGTCCACGAC CCAATCAACC TAATGCTGTG
CCGCAGTTTG AGGATAAAGT GGATGCAATT CGTGAAGCAA TCGCACGAAA TCCGCAGGAA
ATTTTTCAAT ATGTGCGCCT ATCTCAGGTA AAACGCGATG ACAAAGTACT CGGCTATCGC
GTCAGTCCCG GTAAAGATCC GGTACTGTTT GAATCAATAG GTTTACAAGA TGGCGATATG
GCAGTGGCAC TGAATGGCCT AGATCTGACC GATCCTAATG TAATGAACAC GCTATTTCAG
TCGATGAATG AGATGACTGA AATGAGTCTG ACCGTTGAGC GTGATGGTCA ACAACATGAT
GTATATATTC AATTTTAA
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| Protein sequence | MEFKQLPPLA AWPRLLSQNT LRWQKPISEG LTLLLLVASA WTLGKMVWVV SAEQTPVPTW
SPTLSGLKAE RQPLDISVLQ KGELFGVFTE PKEAPVVEQP VVVDAPKTRL SLVLSGVVAS
NDAQKSLAVI ANRGVQATYG INEVIEGTQA KLKAVMPDRV IISNSGRDET LMLEGLDYTA
PATASVSNPP RPRPNQPNAV PQFEDKVDAI REAIARNPQE IFQYVRLSQV KRDDKVLGYR
VSPGKDPVLF ESIGLQDGDM AVALNGLDLT DPNVMNTLFQ SMNEMTEMSL TVERDGQQHD
VYIQF
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