| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2305 |
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| Symbol | epsE |
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| ID | 5136776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2457534 |
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| End bp | 2459045 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640533760 |
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| Product | general secretion pathway protein E |
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| Protein accession | YP_001218220 |
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| Protein GI | 147673384 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAA TGGTGATCTC TCCAGCTGAG CGACAGTCGA TTCGTCGTCT GCCCTTTAGC
TTCGCCAATC GCTTTAAGTT GGTGCTGGAT TGGAATGAGG ATTTCTCCCA AGCCAGCATT
TATTACTTAG CGCCGTTGTC GATGGAGGCG CTCGTCGAAA CCAAGCGGGT GGTCAAGCAC
GCTTTCCAAC TGATTGAGCT CTCTCAAGCG GAGTTTGAAA GCAAGCTAAC CCAAGTCTAT
CAGCGTGATT CTTCAGAAGC GCGTCAATTG ATGGAAGACA TTGGTGCCGA CAGTGATGAC
TTCTTCTCAC TGGCGGAAGA GCTGCCTCAA AACGAAGATT TGCTAGAAAG TGAAGATGAT
GCGCCGATCA TCAAACTGAT CAACGCCATG TTGGGCGAAG CGATCAAAGA AGGCGCGTCA
GATATTCACA TTGAAACTTT TGAAAAAACA CTGTCGATCC GTTTTCGAGT CGATGGCGTG
CTGCGCGAAG TACTGGCACC CAGCCGCAAA CTCTCATCGC TGCTCGTTTC ACGGGTCAAA
GTGATGGCCA AGCTCGACAT TGCCGAAAAA CGTGTGCCGC AAGATGGCCG TATTTCGCTG
CGTATCGGTG GCCGCGCGGT CGATGTGCGG GTTTCAACCA TGCCTTCATC ACATGGTGAG
CGAGTGGTAA TGCGTTTGCT GGATAAAAAC GCGACGCGCC TTGATCTGCA CAGTTTGGGT
ATGACGGCGC ATAACCATGA TAATTTCCGC CGTTTGATTA AGCGGCCGCA TGGGATCATT
CTGGTGACTG GCCCAACCGG CTCGGGTAAA TCGACCACCT TGTACGCGGG TTTGCAAGAG
CTCAACAGCA GCGAGCGCAA CATTTTAACC GTAGAAGATC CGATCGAATT TGATATTGAT
GGTATCGGTC AGACCCAAGT CAACCCAAGG GTAGACATGA CCTTCGCACG GGGGCTACGC
GCTATTTTGC GTCAAGACCC CGATGTGGTG ATGGTGGGGG AAATTCGTGA TTTGGAAACG
GCGCAAATTG CAGTGCAAGC CTCGCTGACT GGTCACTTAG TGATGTCGAC TCTGCACACC
AACACGGCCG TTGGGGCGGT GACTCGGCTG CGCGATATGG GCATCGAGCC TTTTTTGATC
TCCTCTTCAC TGCTCGGTGT TCTGGCTCAG CGCTTGGTGC GCACCTTATG CCCAGATTGC
AAAGAGCCTT ACGAGGCGGA CAAAGAGCAG CGCAAACTGT TTGATAGCAA GAAAAAAGAA
CCGCTGATCC TTTATCGTGC AACGGGCTGC CCTAAATGTA ACCACAAAGG TTACCGTGGC
CGAACCGGTA TCCACGAGCT GCTGCTGGTG GATGACGCGT TGCAGGAGCT GATCCATAGC
GAGGCGGGCG AACAGGCGAT GGAGAAACAC ATTCGCGCGA CCACGCCGAG CATTCGTGAT
GATGGTCTAG ATAAGGTGCG CCAAGGCATT ACTTCGCTAG AAGAAGTGAT GCGGGTGACT
AAGGAGTCCT AA
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| Protein sequence | MTEMVISPAE RQSIRRLPFS FANRFKLVLD WNEDFSQASI YYLAPLSMEA LVETKRVVKH
AFQLIELSQA EFESKLTQVY QRDSSEARQL MEDIGADSDD FFSLAEELPQ NEDLLESEDD
APIIKLINAM LGEAIKEGAS DIHIETFEKT LSIRFRVDGV LREVLAPSRK LSSLLVSRVK
VMAKLDIAEK RVPQDGRISL RIGGRAVDVR VSTMPSSHGE RVVMRLLDKN ATRLDLHSLG
MTAHNHDNFR RLIKRPHGII LVTGPTGSGK STTLYAGLQE LNSSERNILT VEDPIEFDID
GIGQTQVNPR VDMTFARGLR AILRQDPDVV MVGEIRDLET AQIAVQASLT GHLVMSTLHT
NTAVGAVTRL RDMGIEPFLI SSSLLGVLAQ RLVRTLCPDC KEPYEADKEQ RKLFDSKKKE
PLILYRATGC PKCNHKGYRG RTGIHELLLV DDALQELIHS EAGEQAMEKH IRATTPSIRD
DGLDKVRQGI TSLEEVMRVT KES
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