Gene VC0395_A2305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2305 
SymbolepsE 
ID5136776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2457534 
End bp2459045 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content53% 
IMG OID640533760 
Productgeneral secretion pathway protein E 
Protein accessionYP_001218220 
Protein GI147673384 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID[TIGR02533] general secretory pathway protein E 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAA TGGTGATCTC TCCAGCTGAG CGACAGTCGA TTCGTCGTCT GCCCTTTAGC 
TTCGCCAATC GCTTTAAGTT GGTGCTGGAT TGGAATGAGG ATTTCTCCCA AGCCAGCATT
TATTACTTAG CGCCGTTGTC GATGGAGGCG CTCGTCGAAA CCAAGCGGGT GGTCAAGCAC
GCTTTCCAAC TGATTGAGCT CTCTCAAGCG GAGTTTGAAA GCAAGCTAAC CCAAGTCTAT
CAGCGTGATT CTTCAGAAGC GCGTCAATTG ATGGAAGACA TTGGTGCCGA CAGTGATGAC
TTCTTCTCAC TGGCGGAAGA GCTGCCTCAA AACGAAGATT TGCTAGAAAG TGAAGATGAT
GCGCCGATCA TCAAACTGAT CAACGCCATG TTGGGCGAAG CGATCAAAGA AGGCGCGTCA
GATATTCACA TTGAAACTTT TGAAAAAACA CTGTCGATCC GTTTTCGAGT CGATGGCGTG
CTGCGCGAAG TACTGGCACC CAGCCGCAAA CTCTCATCGC TGCTCGTTTC ACGGGTCAAA
GTGATGGCCA AGCTCGACAT TGCCGAAAAA CGTGTGCCGC AAGATGGCCG TATTTCGCTG
CGTATCGGTG GCCGCGCGGT CGATGTGCGG GTTTCAACCA TGCCTTCATC ACATGGTGAG
CGAGTGGTAA TGCGTTTGCT GGATAAAAAC GCGACGCGCC TTGATCTGCA CAGTTTGGGT
ATGACGGCGC ATAACCATGA TAATTTCCGC CGTTTGATTA AGCGGCCGCA TGGGATCATT
CTGGTGACTG GCCCAACCGG CTCGGGTAAA TCGACCACCT TGTACGCGGG TTTGCAAGAG
CTCAACAGCA GCGAGCGCAA CATTTTAACC GTAGAAGATC CGATCGAATT TGATATTGAT
GGTATCGGTC AGACCCAAGT CAACCCAAGG GTAGACATGA CCTTCGCACG GGGGCTACGC
GCTATTTTGC GTCAAGACCC CGATGTGGTG ATGGTGGGGG AAATTCGTGA TTTGGAAACG
GCGCAAATTG CAGTGCAAGC CTCGCTGACT GGTCACTTAG TGATGTCGAC TCTGCACACC
AACACGGCCG TTGGGGCGGT GACTCGGCTG CGCGATATGG GCATCGAGCC TTTTTTGATC
TCCTCTTCAC TGCTCGGTGT TCTGGCTCAG CGCTTGGTGC GCACCTTATG CCCAGATTGC
AAAGAGCCTT ACGAGGCGGA CAAAGAGCAG CGCAAACTGT TTGATAGCAA GAAAAAAGAA
CCGCTGATCC TTTATCGTGC AACGGGCTGC CCTAAATGTA ACCACAAAGG TTACCGTGGC
CGAACCGGTA TCCACGAGCT GCTGCTGGTG GATGACGCGT TGCAGGAGCT GATCCATAGC
GAGGCGGGCG AACAGGCGAT GGAGAAACAC ATTCGCGCGA CCACGCCGAG CATTCGTGAT
GATGGTCTAG ATAAGGTGCG CCAAGGCATT ACTTCGCTAG AAGAAGTGAT GCGGGTGACT
AAGGAGTCCT AA
 
Protein sequence
MTEMVISPAE RQSIRRLPFS FANRFKLVLD WNEDFSQASI YYLAPLSMEA LVETKRVVKH 
AFQLIELSQA EFESKLTQVY QRDSSEARQL MEDIGADSDD FFSLAEELPQ NEDLLESEDD
APIIKLINAM LGEAIKEGAS DIHIETFEKT LSIRFRVDGV LREVLAPSRK LSSLLVSRVK
VMAKLDIAEK RVPQDGRISL RIGGRAVDVR VSTMPSSHGE RVVMRLLDKN ATRLDLHSLG
MTAHNHDNFR RLIKRPHGII LVTGPTGSGK STTLYAGLQE LNSSERNILT VEDPIEFDID
GIGQTQVNPR VDMTFARGLR AILRQDPDVV MVGEIRDLET AQIAVQASLT GHLVMSTLHT
NTAVGAVTRL RDMGIEPFLI SSSLLGVLAQ RLVRTLCPDC KEPYEADKEQ RKLFDSKKKE
PLILYRATGC PKCNHKGYRG RTGIHELLLV DDALQELIHS EAGEQAMEKH IRATTPSIRD
DGLDKVRQGI TSLEEVMRVT KES