Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2301 |
Symbol | epsI |
ID | 5136644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2454872 |
End bp | 2455225 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640533756 |
Product | general secretion pathway protein I |
Protein accession | YP_001218216 |
Protein GI | 147675768 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR01707] general secretion pathway protein I [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGTA AACGCGGTTT TACTTTGCTT GAAGTGCTGG TCGCGCTGGC AATTTTTGCT ACCGCGGCGA TCAGTGTGAT CCGCTCGGTC AGTCAACACA TCAATACGGT CAATTATCTT GAAGAGAAGA TGTTTGCGGC CATGGTCGTG GATAACCAAA TGGCGCAAGT GATGCTCAAT CCGCAATCTT TAGCGGCGCG TGAGGGCAGT GAGCAGATGG CCGGACGGAC TTGGTACTGG AAGCTGAGTC CTGTCAAAAC CGCCGACAAT CTGCTCAAAG CCTTTGATGT CAGTGTCGCC ACAGAAAAAG GCGCGACCCC AGTCGTGACG GTGCGTAGCT ATGTGGCGAA CTAA
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Protein sequence | MKSKRGFTLL EVLVALAIFA TAAISVIRSV SQHINTVNYL EEKMFAAMVV DNQMAQVMLN PQSLAAREGS EQMAGRTWYW KLSPVKTADN LLKAFDVSVA TEKGATPVVT VRSYVAN
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