| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2298 |
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| Symbol | epsL |
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| ID | 5136419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2452040 |
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| End bp | 2453251 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533753 |
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| Product | general secretion pathway protein L |
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| Protein accession | YP_001218213 |
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| Protein GI | 147673681 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3297] Type II secretory pathway, component PulL |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGAGT TTCTGACCGT TCGACTGAGT AGTCAAAAAG AGGCCGATAT CCCTTGGCTG
GTTTGGTCTG CCGAGCAGCA AGAAGTGATT GCCAGCGGCC AAGTGGCTGG TTGGGAAGCC
TTGCATGAAA TTGAGTCTTA TGCTGATCAG CGCAGCGTAG TGGTATTACT GGCGGCGAGT
GATTTGATTT TAACGTCAGT GGAGATCCCG CCCGGCGCTT CTCGTCAGCT TGAAAATATG
CTGCCGTATT TGTTAGAAGA TGAAATCGCC CAAGATGTGG AAGATGTGCA CTTTTGTGTG
CTGAGTAAAG GACGAGAAAC GGCGGATGTG GTCGGTGTCG ATCGTCTTTG GCTGCGCGCT
TGCTTAGATC ATCTCAAAGC GTGCGGTTTT GATGTGAAGC GCGTATTGCC TGATGTACTG
GCGATCCCTC GCCCAGAGCA CGGTTTAGCT GCCCTGCAAT TGGGTGATGA GTGGTTAGTG
CGTAAAAGCA CTACGCAAGG GATGGCAGTG GACGCGCAGT GGTTAAGCTT ACTGGCCGCT
TCCGATTGGG TGCAGAATGA GGGTGAGTAT TTGCCTTTGC AAGCGCTCAC GCCGCTTCCA
GAGCTGAGCT TAGCCGAAAC CCAAGAGTGG CGTTATGAGC CGAGCGGTTT AGTCATGCAA
CTGCTGACTC AGGAGGCCTT AACCAGCAAG TTCAACTTGC TGACGGGGAG TTTTAAACTC
AAGTCTTCTT GGCTGCGGTA TTGGCAAATA TGGCGCAAAG TGGCGATCGC TGCTGGGCTA
TTTGTCGCGG TATCCATCAG TTATTCGCTG TTTCAGGCGC ATCAATACGA AGCACAAGCG
GACGCTTACC GCGCGGAAAG TGAGCGGATT TTCCGCAGCA TCTTCCCTGA TAAACAGAAA
ATCCCGACCG TGACTTATTT GAAAAGACAG ATGAGTGATG AGATGGCGCG TTTATCTGGC
GGTGCCAGTG TGGGCAGCGT TTTGAAGTGG CTAAGCCCGT TGCCTGAGGC TTTGAAAGGG
GTCAATCTAC AACTGCAAAG CATCAAATTT GACAGTAACC GCAGTGAGAT TCGCCTAGAA
GCGACCAGTC GTGATTTCCA AAGTTTTGAA CAAGCTCGCA CTCAGCTTGA GCAGTATTTT
GCTGTTGAAC AGGGGCAGCT CAATAAAAAT GGCGAGCAAG TGTTTGGCGT GTTTGTGGTG
AAGCCCAAGT AA
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| Protein sequence | MSEFLTVRLS SQKEADIPWL VWSAEQQEVI ASGQVAGWEA LHEIESYADQ RSVVVLLAAS
DLILTSVEIP PGASRQLENM LPYLLEDEIA QDVEDVHFCV LSKGRETADV VGVDRLWLRA
CLDHLKACGF DVKRVLPDVL AIPRPEHGLA ALQLGDEWLV RKSTTQGMAV DAQWLSLLAA
SDWVQNEGEY LPLQALTPLP ELSLAETQEW RYEPSGLVMQ LLTQEALTSK FNLLTGSFKL
KSSWLRYWQI WRKVAIAAGL FVAVSISYSL FQAHQYEAQA DAYRAESERI FRSIFPDKQK
IPTVTYLKRQ MSDEMARLSG GASVGSVLKW LSPLPEALKG VNLQLQSIKF DSNRSEIRLE
ATSRDFQSFE QARTQLEQYF AVEQGQLNKN GEQVFGVFVV KPK
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