Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2298 |
Symbol | epsL |
ID | 5136419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2452040 |
End bp | 2453251 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640533753 |
Product | general secretion pathway protein L |
Protein accession | YP_001218213 |
Protein GI | 147673681 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3297] Type II secretory pathway, component PulL |
TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGAGT TTCTGACCGT TCGACTGAGT AGTCAAAAAG AGGCCGATAT CCCTTGGCTG GTTTGGTCTG CCGAGCAGCA AGAAGTGATT GCCAGCGGCC AAGTGGCTGG TTGGGAAGCC TTGCATGAAA TTGAGTCTTA TGCTGATCAG CGCAGCGTAG TGGTATTACT GGCGGCGAGT GATTTGATTT TAACGTCAGT GGAGATCCCG CCCGGCGCTT CTCGTCAGCT TGAAAATATG CTGCCGTATT TGTTAGAAGA TGAAATCGCC CAAGATGTGG AAGATGTGCA CTTTTGTGTG CTGAGTAAAG GACGAGAAAC GGCGGATGTG GTCGGTGTCG ATCGTCTTTG GCTGCGCGCT TGCTTAGATC ATCTCAAAGC GTGCGGTTTT GATGTGAAGC GCGTATTGCC TGATGTACTG GCGATCCCTC GCCCAGAGCA CGGTTTAGCT GCCCTGCAAT TGGGTGATGA GTGGTTAGTG CGTAAAAGCA CTACGCAAGG GATGGCAGTG GACGCGCAGT GGTTAAGCTT ACTGGCCGCT TCCGATTGGG TGCAGAATGA GGGTGAGTAT TTGCCTTTGC AAGCGCTCAC GCCGCTTCCA GAGCTGAGCT TAGCCGAAAC CCAAGAGTGG CGTTATGAGC CGAGCGGTTT AGTCATGCAA CTGCTGACTC AGGAGGCCTT AACCAGCAAG TTCAACTTGC TGACGGGGAG TTTTAAACTC AAGTCTTCTT GGCTGCGGTA TTGGCAAATA TGGCGCAAAG TGGCGATCGC TGCTGGGCTA TTTGTCGCGG TATCCATCAG TTATTCGCTG TTTCAGGCGC ATCAATACGA AGCACAAGCG GACGCTTACC GCGCGGAAAG TGAGCGGATT TTCCGCAGCA TCTTCCCTGA TAAACAGAAA ATCCCGACCG TGACTTATTT GAAAAGACAG ATGAGTGATG AGATGGCGCG TTTATCTGGC GGTGCCAGTG TGGGCAGCGT TTTGAAGTGG CTAAGCCCGT TGCCTGAGGC TTTGAAAGGG GTCAATCTAC AACTGCAAAG CATCAAATTT GACAGTAACC GCAGTGAGAT TCGCCTAGAA GCGACCAGTC GTGATTTCCA AAGTTTTGAA CAAGCTCGCA CTCAGCTTGA GCAGTATTTT GCTGTTGAAC AGGGGCAGCT CAATAAAAAT GGCGAGCAAG TGTTTGGCGT GTTTGTGGTG AAGCCCAAGT AA
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Protein sequence | MSEFLTVRLS SQKEADIPWL VWSAEQQEVI ASGQVAGWEA LHEIESYADQ RSVVVLLAAS DLILTSVEIP PGASRQLENM LPYLLEDEIA QDVEDVHFCV LSKGRETADV VGVDRLWLRA CLDHLKACGF DVKRVLPDVL AIPRPEHGLA ALQLGDEWLV RKSTTQGMAV DAQWLSLLAA SDWVQNEGEY LPLQALTPLP ELSLAETQEW RYEPSGLVMQ LLTQEALTSK FNLLTGSFKL KSSWLRYWQI WRKVAIAAGL FVAVSISYSL FQAHQYEAQA DAYRAESERI FRSIFPDKQK IPTVTYLKRQ MSDEMARLSG GASVGSVLKW LSPLPEALKG VNLQLQSIKF DSNRSEIRLE ATSRDFQSFE QARTQLEQYF AVEQGQLNKN GEQVFGVFVV KPK
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