Gene VC0395_A2294 details

Gene Information

• Locus tag: VC0395_A2294
• Symbol: nudE
• ID: 5136535
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 2449257
• End bp: 2449871
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640533749
• Product: ADP-ribose diphosphatase NudE
• Protein accession: YP_001218209
• Protein GI: 147674005
• COG category: [L] Replication, recombination and repair; [R] General function prediction only
• COG ID: [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes

Plasmid Coverage information

• Num covering plasmid clones: 59
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGCGTTT CAAACTGTGA TTATTTCTCA TATATTAAGA AAACTTTTTT GCTCAGGAGT 
CTGCGTATGT CATCCAAATC TTTACCAGAA ATTCTGGATC GTGAAACGGT CGCCAAATCG 
CGTCTGTTTA CTATTGAAGC TTTGGATCTG CGTTTCTCAA ACGGTGAACA AAGAACTTAC 
GAGCGTATGA AGCCGAGCGG TCGTCATGCG GTGATGATGG TGCCGATCAC AGCCCAAGGT 
GATTTACTCC TCGTGCGCGA ATACGCTGCA GGAACGGAGC GTTACGAATT AGGCTTTCCA 
AAAGGCTTGG TCGATCATGG TGAAACCGCC GAGCAAGCGG CCAATCGTGA ATTAAAAGAA 
GAAATTGGTT TTGGCGCGCG CCAGTTAACG CCGCTCAAAG AGGTGGTGCT GGCTCCTTCT 
TACTTCTCCA GTAAAATGGT TCTTTTTGTT GCTCAGGATC TATACTCAGA ACAGTTAGAG 
GGGGATGAGC CAGAGCCGTT GGAGATCATT CGCTGGCCTT TAGCACAAGC AGAAGATCTG 
CTGACCCATC TCGATTTTTG TGAAGCGCGC AGCATCACAG CCTTGCTGTT GGCTCTGCGT 
TTTCTTCAGG CGTGA 

 

Protein sequence

MSVSNCDYFS YIKKTFLLRS LRMSSKSLPE ILDRETVAKS RLFTIEALDL RFSNGEQRTY 
ERMKPSGRHA VMMVPITAQG DLLLVREYAA GTERYELGFP KGLVDHGETA EQAANRELKE 
EIGFGARQLT PLKEVVLAPS YFSSKMVLFV AQDLYSEQLE GDEPEPLEII RWPLAQAEDL 
LTHLDFCEAR SITALLLALR FLQA