Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2292 |
Symbol | |
ID | 5136052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2447649 |
End bp | 2448509 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640533747 |
Product | ComF family protein |
Protein accession | YP_001218207 |
Protein GI | 147675590 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCAGC CGTGTACCAA TACCAGATCT TGCCCTTGTC CACTGACTTG CCAATACAAC GCCATGGTCA CAGTTTCTCC GTCTATTTCC ATCTTCATCC ACTCTGCCAA TTGGCAAGAT GAAGCACATT ACCCCGATTC TTGGCTCGCT ATGTTAACCC ATTGGCTCAG AAAAACTACC GCACCACTGC TGACTCCGGA ATGTCATCTC TGTCGACTGG CGCTAGATAC AAATTCGCCG TTTGGCGTCT GCTCTGCCTG CCAAGCTTGG CTTGAGCACG GTTATCGCTG CGCACGCTGC GGTTTACCGA CTCTTACCCC AGTTGATCAG TGCGGGCAGT GTTTGGGTCA GCCTCCGCCG TGGCGAAAAC TGATGTGTGT CGGCGATTAC CGCTTTCCAC TTAGTGATGC GGTGCATCAA CTCAAATACC AACGCCAGTT TTGGCAAGCG CCGCGCTTGG CTAAGCTACT CGCCACCCAG ATTAACGAGC CAGCCCCGTT GCTGTGCAGC GTGCCACTGC ATTGGCGGCG ACGCTGGCAA CGCGGCTTTA ATCAAAGCGA TCTGCTGGCG CGCGAGTTAG CCAATATGCT GAACGTTGAA TATGACCACC AACTCTTTGC ACGCCGCCGA GCGACACCGC ATCAACAAGG ACTCAGCAAG GCGCAGCGAA TCCACAACCT ACGCGATGCG TTTGTGCTGA ATCATCCGCC AAACCAACCA CATGTTGCGA TTGTGGACGA TGTGGTGACC ACAGGCAGTA CGATCCGACA TTTATGCGAT TTACTGCTTG ATGTCGGTGT GCAAAGCATT GATATTTACT GCATATGCCG CACTCCCGAG CCGAAAGATA GCCACGGTTG A
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Protein sequence | MPQPCTNTRS CPCPLTCQYN AMVTVSPSIS IFIHSANWQD EAHYPDSWLA MLTHWLRKTT APLLTPECHL CRLALDTNSP FGVCSACQAW LEHGYRCARC GLPTLTPVDQ CGQCLGQPPP WRKLMCVGDY RFPLSDAVHQ LKYQRQFWQA PRLAKLLATQ INEPAPLLCS VPLHWRRRWQ RGFNQSDLLA RELANMLNVE YDHQLFARRR ATPHQQGLSK AQRIHNLRDA FVLNHPPNQP HVAIVDDVVT TGSTIRHLCD LLLDVGVQSI DIYCICRTPE PKDSHG
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