| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2272 |
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| Symbol | |
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| ID | 5137327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2422111 |
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| End bp | 2423601 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533728 |
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| Product | type II secretory pathway protein |
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| Protein accession | YP_001218188 |
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| Protein GI | 147674664 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATAATC CTACTTTCAA TCTCTCACGC GTGAATCGCG TGCTGCTGCC GATGTTGGCC
AGTACCGTGC TGCTCGGCTG CAATGAGTCA AACACTAATC CAGATAACAA CACCCAAGGC
CCAGTCACCC CTCAACAGTT GGTGAAAGTC TATTACCAAG CGACCACCGC CCAGCGCAGT
GGTGACAGCT CGCCTTACAG CAAAGCTTCT CTTTATGTTT GGAACAATGA GCAGTGCGCG
GCCTATGCGG GCAATAACCC TGACGCGAAC GATTGGGCCA AGGGTCTATT GCCCACCGGG
ATTGATGATG AGTTAGGCGC CTATTGGGAG TTGCCCTATC ATGCGAATGA GTCCACTCAG
TGCATTAACT TTATTCCACG GATTGATGGG CAAAAACCAC TGGGCGATTA CGATGCCAAA
GTCGATTTAA CTCAGTTAGG TGCGGGTAAT GCGGTTTACA CCCAGCAAGG CGTTGCGGCA
GTCTATCCAG AGTTAATCCC CCGTAATGCA CTGCCGGCCA ATACCGCGCG CCTGTATCTC
AATACGCAAG ATGGCGATGA AAGCTTCTTC ACCCTGCATG TGTGGAATGA AGGTGAATGC
CAAAACTATG CGGCCAGCAA TTCAGCTTGG CCGGGCATCG CGCCGAGCGG ATACAGTAAA
ACCTATGGCC CTTATTGGGA TTTACCGATT AATGGCCGCG ATAACTGCAT CAATGTTATC
CCCAACAATA AAACCAACGG CGACTATCAA ACCGCCAATT TGAAACTAGA TTTCACCAAA
ACGGGAGCGA TTGGCCCTAT CGGCTTTGTG TTCAAAGGCA CCGACAAAAT TTACTACCAG
CCTTTGGCAA AACGGCCACA AAATCAGGTT GAACTGAGTG GTGCAAGCGC GATTTTTGCG
GATGCGTCGA CCTTACTGGT GGGCAATCTG GAAGCGACAT CAGCCACTCT GTATTACTCC
CGACAAGGTC AACTCCGTTT TGACAGTGCC AGTAAAACCG TACTCAATGC CGACCATACG
ATTACCTCTC AGCGCCCAAG CGGCACCGAA TGGCAAGCGC AAAAACCGCA TTTGACCTCA
GGCTTTCGTG GCTTTGAGTT TGATTTCCAA GCCGCAGGGT TAGATCTCAA AACCTTATTG
CAAGGCCAAC TGTTACTGGT TGCCAGTGAT ACCACAGGCG TCCTTTTAGC AACCGAAGTA
CAGCCCGCCA GTGCCTTGGA TGCGCTGTAT GCGGATAGCG CGAGCACTTT GCAATATGGC
GCACTGATCA ATCCTGATGG CAGCACCACT TTCCGCTTAT GGGCTCCGAC AGCGCAAGCG
GTATCGCTGA TCCCTTACGG GACGGATAAA CAAGCCAAAA CACCGATTGC GATGAGCTTT
GATACCCAGT CAGGCAGTTG GAGTGCCGTC AACACAGCAC TGGCGCATGG CGATTACTAC
AAATCACCGT CTATCACCCT GCGACTGACC AGATTGAAAC CTATCAAGTG A
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| Protein sequence | MNNPTFNLSR VNRVLLPMLA STVLLGCNES NTNPDNNTQG PVTPQQLVKV YYQATTAQRS
GDSSPYSKAS LYVWNNEQCA AYAGNNPDAN DWAKGLLPTG IDDELGAYWE LPYHANESTQ
CINFIPRIDG QKPLGDYDAK VDLTQLGAGN AVYTQQGVAA VYPELIPRNA LPANTARLYL
NTQDGDESFF TLHVWNEGEC QNYAASNSAW PGIAPSGYSK TYGPYWDLPI NGRDNCINVI
PNNKTNGDYQ TANLKLDFTK TGAIGPIGFV FKGTDKIYYQ PLAKRPQNQV ELSGASAIFA
DASTLLVGNL EATSATLYYS RQGQLRFDSA SKTVLNADHT ITSQRPSGTE WQAQKPHLTS
GFRGFEFDFQ AAGLDLKTLL QGQLLLVASD TTGVLLATEV QPASALDALY ADSASTLQYG
ALINPDGSTT FRLWAPTAQA VSLIPYGTDK QAKTPIAMSF DTQSGSWSAV NTALAHGDYY
KSPSITLRLT RLKPIK
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