Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2268 |
Symbol | fxsA |
ID | 5136369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2417071 |
End bp | 2417556 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640533724 |
Product | FxsA |
Protein accession | YP_001218184 |
Protein GI | 147675670 |
COG category | [R] General function prediction only |
COG ID | [COG3030] Protein affecting phage T7 exclusion by the F plasmid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0164931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCCCGA TACTACTGTT TTTATTTATT GCAGTCCCTG TGATTGAAAT CGCGCTGTTT ATTCAAGTCG GCGGCGTGCT CGGTGTGTGG CCGACCATCG CCCTTGTGCT GTTAACCGCA ATTGTTGGTG CTTCGCTGGT GCGTAGCCAA GGTTTACAAA CGCTGTTGAC CGTACAACAG CGCCTAGCGC AAGGCCAACT GCCCGCACAG CAAATTTTAG AAGGGGTAAT GTTAGCCGTG GCGGGTGTGT TGTTACTGAC CCCAGGCTTT TTCACGGACA TCCTCGGTAT GCTGGTACTG CTGCCTGCGC CGCGTGCTTA TTTCGCAAAG CAGTTGATGA GTCGTGTGGT GGTCGGCAAT ATCCACGCCA GTGGAGCCGG TTTTGAGCAG CCCAACCCTT TTCACGATCG TGCAAATCCA AACGGCACGA CCTATGAAGG TGAATTTGAG CGCAAAGACG ATCAAGACCA GCACCGTTTG AAATAA
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Protein sequence | MFPILLFLFI AVPVIEIALF IQVGGVLGVW PTIALVLLTA IVGASLVRSQ GLQTLLTVQQ RLAQGQLPAQ QILEGVMLAV AGVLLLTPGF FTDILGMLVL LPAPRAYFAK QLMSRVVVGN IHASGAGFEQ PNPFHDRANP NGTTYEGEFE RKDDQDQHRL K
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