| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2267 |
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| Symbol | |
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| ID | 5135779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2416561 |
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| End bp | 2417037 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533723 |
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| Product | rRNA methylase |
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| Protein accession | YP_001218183 |
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| Protein GI | 147674422 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00105703 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGATA TCGCTCTCTA CGAACCCGAA ATCGCACCCA ATACGGGTAA CATCATTCGT
TTGTGTGCCA ACTGTGGCGC GAACTTGCAT CTCATCGAGC CACTGGGTTT TGATCTGGAA
GAGAAAAAGG TGCGCCGCGC CGGTTTGGAT TACCATGATT TAGCTCGAGT GACGCGCCAT
AAAGATTACG CCGCGTTTAT CGAATACTTA CAGCGTGAGC GAGGCTCTTT CCGCTTGTTT
GCTTGCACCA CGAAAACCAC ACAACATCAT GTGGATGCCC AATTTCAACA AGGCGATGTG
CTGCTGTTTG GTCCAGAAAC ACGCGGTTTG CCTGCCGAGC TGATTGCCAG CTTGCCCGCC
GAGCAGCGGA TTCGAATCCC GATGATGCCA GAAGCGCGCA GCCTAAACCT TTCCAATGCG
GTAGCGATTA TTGCTTTTGA AGCGTGGCGT CAAATGGGGT TTGATGGCGC ACGCTAA
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| Protein sequence | MFDIALYEPE IAPNTGNIIR LCANCGANLH LIEPLGFDLE EKKVRRAGLD YHDLARVTRH
KDYAAFIEYL QRERGSFRLF ACTTKTTQHH VDAQFQQGDV LLFGPETRGL PAELIASLPA
EQRIRIPMMP EARSLNLSNA VAIIAFEAWR QMGFDGAR
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